GWAS QTL name | Original name | Associated locus | p-value | Chromosome | Linkage Group |
Seed set 1-g1 | Number of four seed per pod | Chr02_14797903 | 5.75E-11 | Gm02 | D1b |
Seed set 1-g2 | Number of four seed per pod | Chr03_12539660 | 1.78E-09 | Gm03 | N |
Seed set 1-g3 | Number of four seed per pod | Chr05_35995777 | 2.00E-10 | Gm05 | A1 |
Seed set 1-g4.1 | Number of four seed per pod | Chr10_50270206 | 3.24E-14 | Gm10 | O |
Seed set 1-g4.2 | Number of four seed per pod | Chr10_50981304 | 3.24E-14 | Gm10 | O |
Seed set 1-g4.3 | Number of four seed per pod | Chr10_51354084 | 3.24E-14 | Gm10 | O |
Seed set 1-g5.1 | Number of four seed per pod | Chr20_35408048 | 5.62E-87 | Gm20 | I |
Seed set 1-g5.2 | Number of four seed per pod | Chr20_35828042 | 5.62E-87 | Gm20 | I |
Seed set 1-g5.3 | Number of four seed per pod | Chr20_36674350 | 5.62E-87 | Gm20 | I |
Seed set 1-g6.1 | Number of four seed per pod | Chr05_34595284 | 2.24E-13 | Gm05 | A1 |
Seed set 1-g6.2 | Number of four seed per pod | Chr05_34901192 | 2.24E-13 | Gm05 | A1 |
Seed set 1-g6.3 | Number of four seed per pod | Chr05_35011212 | 2.24E-13 | Gm05 | A1 |
Seed set 1-g7 | Number of one seed per pod | Chr06_50955096 | 5.50E-08 | Gm06 | C2 |
Seed set 1-g8.1 | Number of one seed per pod | Chr11_8911653 | 2.34E-08 | Gm11 | B1 |
Seed set 1-g8.2 | Number of one seed per pod | Chr11_8911723 | 2.34E-08 | Gm11 | B1 |
Seed set 1-g9.1 | Number of one seed per pod | Chr13_23631174 | 4.27E-08 | Gm13 | F |
Seed set 1-g9.2 | Number of one seed per pod | Chr13_23649175 | 4.27E-08 | Gm13 | F |
Seed set 1-g10 | Number of one seed per pod | Chr13_23863861 | 1.62E-07 | Gm13 | F |
Seed set 1-g11 | Number of one seed per pod | Chr01_52039777 | 1.74E-08 | Gm01 | D1a |
Seed set 1-g12.1 | Number of one seed per pod | Chr02_14459921 | 2.14E-07 | Gm02 | D1b |
Seed set 1-g12.2 | Number of one seed per pod | Chr02_14463444 | 2.14E-07 | Gm02 | D1b |
Seed set 1-g13.1 | Number of one seed per pod | Chr03_659279 | 4.37E-08 | Gm03 | N |
Seed set 1-g13.2 | Number of one seed per pod | Chr03_669584 | 4.37E-08 | Gm03 | N |
Seed set 1-g14.1 | Number of one seed per pod | Chr03_33533018 | 9.12E-11 | Gm03 | N |
Seed set 1-g14.2 | Number of one seed per pod | Chr03_33542939 | 9.12E-11 | Gm03 | N |
Seed set 1-g15.1 | Number of one seed per pod | Chr08_10962492 | 8.32E-08 | Gm08 | A2 |
Seed set 1-g15.2 | Number of one seed per pod | Chr08_10979773 | 8.32E-08 | Gm08 | A2 |
Seed set 1-g16.1 | Number of one seed per pod | Chr08_46433091 | 4.17E-08 | Gm08 | A2 |
Seed set 1-g16.2 | Number of one seed per pod | Chr08_46454061 | 4.17E-08 | Gm08 | A2 |
Seed set 1-g17.1 | Number of one seed per pod | Chr09_3215373 | 1.29E-08 | Gm09 | K |
Seed set 1-g17.2 | Number of one seed per pod | Chr09_3222171 | 1.29E-08 | Gm09 | K |
Seed set 1-g17.3 | Number of one seed per pod | Chr09_3224372 | 1.29E-08 | Gm09 | K |
Seed set 1-g18.1 | Number of one seed per pod | Chr10_5362354 | 3.39E-08 | Gm10 | O |
Seed set 1-g18.2 | Number of one seed per pod | Chr10_5411439 | 3.39E-08 | Gm10 | O |
Seed set 1-g19.1 | Number of one seed per pod | Chr12_5509317 | 2.04E-10 | Gm12 | H |
Seed set 1-g19.2 | Number of one seed per pod | Chr12_5692082 | 2.04E-10 | Gm12 | H |
Seed set 1-g20 | Number of one seed per pod | Chr12_38592784 | 1.51E-07 | Gm12 | H |
Seed set 1-g21.1 | Number of one seed per pod | Chr16_36034965 | 3.80E-09 | Gm16 | J |
Seed set 1-g21.2 | Number of one seed per pod | Chr16_36035091 | 3.80E-09 | Gm16 | J |
Seed set 1-g22.1 | Number of one seed per pod | Chr18_51584082 | 6.46E-10 | Gm18 | G |
Seed set 1-g22.2 | Number of one seed per pod | Chr18_51678296 | 6.46E-10 | Gm18 | G |
Seed set 1-g22.3 | Number of one seed per pod | Chr18_51684068 | 6.46E-10 | Gm18 | G |
Seed set 1-g23.1 | Number of one seed per pod | Chr18_55940116 | 5.89E-11 | Gm18 | G |
Seed set 1-g23.2 | Number of one seed per pod | Chr18_56137255 | 5.89E-11 | Gm18 | G |
Seed set 1-g23.3 | Number of one seed per pod | Chr18_56472919 | 5.89E-11 | Gm18 | G |
Seed set 1-g24.1 | Number of one seed per pod | Chr19_44926860 | 2.29E-07 | Gm19 | L |
Seed set 1-g24.2 | Number of one seed per pod | Chr19_44926990 | 2.29E-07 | Gm19 | L |
Seed set 1-g24.3 | Number of one seed per pod | Chr19_44946040 | 2.29E-07 | Gm19 | L |
Seed set 1-g25.1 | Number of three seed per pod | Chr06_50426708 | 8.71E-11 | Gm06 | C2 |
Seed set 1-g25.2 | Number of three seed per pod | Chr06_50458245 | 8.71E-11 | Gm06 | C2 |
Seed set 1-g25.3 | Number of three seed per pod | Chr06_50488039 | 8.71E-11 | Gm06 | C2 |
Seed set 1-g26.1 | Number of three seed per pod | Chr13_23566848 | 2.09E-11 | Gm13 | F |
Seed set 1-g26.2 | Number of three seed per pod | Chr13_23712209 | 2.09E-11 | Gm13 | F |
Seed set 1-g26.3 | Number of three seed per pod | Chr13_24090210 | 2.09E-11 | Gm13 | F |
Seed set 1-g27.1 | Number of three seed per pod | Chr19_44873069 | 2.24E-10 | Gm19 | L |
Seed set 1-g27.2 | Number of three seed per pod | Chr19_45899429 | 2.24E-10 | Gm19 | L |
Seed set 1-g28 | Number of three seed per pod | Chr02_4327729 | 8.91E-08 | Gm02 | D1b |
Seed set 1-g29.1 | Number of three seed per pod | Chr13_29034903 | 4.27E-08 | Gm13 | F |
Seed set 1-g29.2 | Number of three seed per pod | Chr13_29064846 | 4.27E-08 | Gm13 | F |
Seed set 1-g29.3 | Number of three seed per pod | Chr13_29802713 | 4.27E-08 | Gm13 | F |
Seed set 1-g30 | Number of three seed per pod | Chr18_55037203 | 1.23E-07 | Gm18 | G |
Seed set 1-g31 | Ratio of four seed per pod | Chr03_12539660 | 2.75E-10 | Gm03 | N |
Seed set 1-g32.1 | Ratio of four seed per pod | Chr03_36990764 | 1.41E-09 | Gm03 | N |
Seed set 1-g32.2 | Ratio of four seed per pod | Chr03_37081007 | 1.41E-09 | Gm03 | N |
Seed set 1-g33 | Ratio of four seed per pod | Chr05_35995777 | 7.41E-11 | Gm05 | A1 |
Seed set 1-g34 | Ratio of four seed per pod | Chr08_8320138 | 2.09E-11 | Gm08 | A2 |
Seed set 1-g35 | Ratio of four seed per pod | Chr08_16990280 | 9.77E-10 | Gm08 | A2 |
Seed set 1-g36.1 | Ratio of four seed per pod | Chr10_50981304 | 3.39E-11 | Gm10 | O |
Seed set 1-g36.2 | Ratio of four seed per pod | Chr10_51354084 | 3.39E-11 | Gm10 | O |
Seed set 1-g37.1 | Ratio of four seed per pod | Chr19_171263 | 3.31E-09 | Gm19 | L |
Seed set 1-g37.2 | Ratio of four seed per pod | Chr19_175246 | 3.31E-09 | Gm19 | L |
Seed set 1-g38.1 | Ratio of four seed per pod | Chr20_35408048 | 4.17E-96 | Gm20 | I |
Seed set 1-g38.2 | Ratio of four seed per pod | Chr20_35828042 | 4.17E-96 | Gm20 | I |
Seed set 1-g38.3 | Ratio of four seed per pod | Chr20_36864748 | 4.17E-96 | Gm20 | I |
Seed set 1-g39.1 | Ratio of four seed per pod | Chr08_23115727 | 3.55E-11 | Gm08 | A2 |
Seed set 1-g39.2 | Ratio of four seed per pod | Chr08_23132059 | 3.55E-11 | Gm08 | A2 |
Seed set 1-g39.3 | Ratio of four seed per pod | Chr08_23294168 | 3.55E-11 | Gm08 | A2 |
Seed set 1-g40 | Ratio of four seed per pod | Chr18_50977030 | 6.46E-10 | Gm18 | G |
Seed set 1-g41.1 | Ratio of one seed per pod | Chr07_5008759 | 8.71E-12 | Gm07 | M |
Seed set 1-g41.2 | Ratio of one seed per pod | Chr07_5009560 | 8.71E-12 | Gm07 | M |
Seed set 1-g41.3 | Ratio of one seed per pod | Chr07_5010394 | 8.71E-12 | Gm07 | M |
Seed set 1-g42 | Ratio of one seed per pod | Chr13_23631174 | 1.10E-07 | Gm13 | F |
Seed set 1-g43.1 | Ratio of three seed per pod | Chr06_50426708 | 5.50E-14 | Gm06 | C2 |
Seed set 1-g43.2 | Ratio of three seed per pod | Chr06_50457715 | 5.50E-14 | Gm06 | C2 |
Seed set 1-g43.3 | Ratio of three seed per pod | Chr06_50488039 | 5.50E-14 | Gm06 | C2 |
Seed set 1-g44.1 | Ratio of three seed per pod | Chr13_23464848 | 6.17E-14 | Gm13 | F |
Seed set 1-g44.2 | Ratio of three seed per pod | Chr13_23769636 | 6.17E-14 | Gm13 | F |
Seed set 1-g44.3 | Ratio of three seed per pod | Chr13_24261217 | 6.17E-14 | Gm13 | F |
Seed set 1-g45.1 | Ratio of three seed per pod | Chr02_3699898 | 4.90E-08 | Gm02 | D1b |
Seed set 1-g45.2 | Ratio of three seed per pod | Chr02_3701362 | 4.90E-08 | Gm02 | D1b |
Seed set 1-g46.1 | Ratio of three seed per pod | Chr12_4759044 | 5.37E-08 | Gm12 | H |
Seed set 1-g46.2 | Ratio of three seed per pod | Chr12_4801855 | 5.37E-08 | Gm12 | H |
Seed set 1-g46.3 | Ratio of three seed per pod | Chr12_4802088 | 5.37E-08 | Gm12 | H |
Seed set 1-g47.1 | Ratio of three seed per pod | Chr13_29713396 | 1.23E-07 | Gm13 | F |
Seed set 1-g47.2 | Ratio of three seed per pod | Chr13_29713397 | 1.23E-07 | Gm13 | F |
Seed set 1-g48.1 | Ratio of three seed per pod | Chr13_40871681 | 1.38E-07 | Gm13 | F |
Seed set 1-g48.2 | Ratio of three seed per pod | Chr13_40890538 | 1.38E-07 | Gm13 | F |
Seed set 1-g48.3 | Ratio of three seed per pod | Chr13_40904291 | 1.38E-07 | Gm13 | F |
Seed set 1-g49.1 | Ratio of three seed per pod | Chr18_55954117 | 2.45E-07 | Gm18 | G |
Seed set 1-g49.2 | Ratio of three seed per pod | Chr18_55954415 | 2.45E-07 | Gm18 | G |
Seed set 1-g50.1 | Ratio of three seed per pod | Chr19_44529859 | 5.62E-10 | Gm19 | L |
Seed set 1-g50.2 | Ratio of three seed per pod | Chr19_45393133 | 5.62E-10 | Gm19 | L |
Seed set 1-g50.3 | Ratio of three seed per pod | Chr19_45570270 | 5.62E-10 | Gm19 | L |
Seed set 1-g51.1 | Ratio of two seed per pod | Chr06_50426708 | 4.07E-11 | Gm06 | C2 |
Seed set 1-g51.2 | Ratio of two seed per pod | Chr06_50487622 | 4.07E-11 | Gm06 | C2 |
Seed set 1-g51.3 | Ratio of two seed per pod | Chr06_50488039 | 4.07E-11 | Gm06 | C2 |
Seed set 1-g52.1 | Ratio of two seed per pod | Chr13_23566848 | 1.78E-12 | Gm13 | F |
Seed set 1-g52.2 | Ratio of two seed per pod | Chr13_23769636 | 1.78E-12 | Gm13 | F |
Seed set 1-g52.3 | Ratio of two seed per pod | Chr13_24076584 | 1.78E-12 | Gm13 | F |
Seed set 1-g53.1 | Ratio of two seed per pod | Chr20_35589687 | 1.78E-16 | Gm20 | I |
Seed set 1-g53.2 | Ratio of two seed per pod | Chr20_35828042 | 1.78E-16 | Gm20 | I |
Seed set 1-g53.3 | Ratio of two seed per pod | Chr20_36429226 | 1.78E-16 | Gm20 | I |
Seed set 1-g54.1 | Ratio of two seed per pod | Chr02_45301846 | 1.35E-07 | Gm02 | D1b |
Seed set 1-g54.2 | Ratio of two seed per pod | Chr02_45360996 | 1.35E-07 | Gm02 | D1b |
Seed set 1-g55.1 | Ratio of two seed per pod | Chr19_44526228 | 3.80E-10 | Gm19 | L |
Seed set 1-g55.2 | Ratio of two seed per pod | Chr19_44568053 | 3.80E-10 | Gm19 | L |
Seed set 1-g55.3 | Ratio of two seed per pod | Chr19_45569736 | 3.80E-10 | Gm19 | L |