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Integrating Genetics and Genomics to Advance Soybean Research



Seed anthocyanin content 1-1
Parent 1:W05
Parent 2:C08
Interval length:2
Percent Variation Explained:68.13
Trait name:Anthocyanidin content

Salt tolerance
Total growth duration
Seed coat color
Trailing growth
Pod number
Seeds per plant
Nodule number
Pod color
Seed antioxidant content
Seed length to width ratio

Qi et al. 2014bIdentification of a novel salt tolerance gene in wild soybean by whole-genome sequencing 
Nature Communications (2014) 5:4340

     
MapLGStartEnd
GmComposite2003_A2 A252.2054.20See this QTL region in Sequence Browser

Gm08:8019871Parent_1Salt tolerant
Gm08:8019871Parent_2Salt intolerant

RIL

ParentTrait
W05Salt tolerant
C08Salt intolerant

Gm08:8019871

Kosambi
QTLCartographer

Locus was approximately placed on the SoyBase Composite2003 genetic map by comparing the given base pair range in the Wm82.a2 genome, identifying the nearest genetically mapped markers on each side of the given range, and interpolating the markerŐs position on the genetic map to a similar relative position.






Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA
 
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