SoyBase SoyBase transitions to NEW site on 10/1/2024
Integrating Genetics and Genomics to Advance Soybean Research

SCN 33-3
Parent 1:Magellan
Parent 2:PI 404198A
Num loci tested:194
Interval length:4.53
Interval LOD score:7.1
Trait name:Reaction to Heterodera glycines

Controlled vocabulary terms associated with the QTL
SourceAccession Number
Plant Trait OntologyTO:0000384
Gene OntologyGO:0009624

     
Other related QTL's
SCN 33-1
SCN 33-2
SCN 33-4
SCN 33-5
SCN 33-6
SCN 33-7

References for the QTL
Guo et al. 2006Quantitative Trait Loci Underlying Resistance to Three Soybean Cyst Nematode Populations in Soybean PI 404198A 
Crop Sci. 2006, 46(1):224-233

     
Maps containing SCN 33-3
MapLGStartEnd
GmComposite2003_G G0.004.53See this QTL region in Sequence Browser

Loci positively associated with the QTL
Satt163Phenotypic_R212.5
Satt163Additive_effect-8.2
Satt163Dominance_effect3.5

Population types used in identification of the QTL
F2:3

Parent trait values associated with the QTL
ParentTrait
MagellanSCN susceptible
PI 404198ASCN races 1,2,3,5 resistant

Loci associated with the QTL
Satt163
Satt309

Methods used to identify the QTL
MapMaker/EXP 3.0b
WINQTLCART 2.0
CIM

Comments about the QTL
Parent_1 is Magellan, Parent_2 is PI 404198A
The trait is resistance to Soybean Cyst Nematode ( SCN ) disease which is caused by the nematode Heterodera glycines. QTL associated with resistance to SCN Race 2
Publication did not assign an individual name to this QTL






Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA
 
USDA Logo
Iowa State University Logo