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Pod dehiscence 2-1
Parent 1:Hayahikari
Parent 2:Toyomusume
Heritability:0.82
Num loci tested:178
Interval length:6.75
Interval LOD score:13.8
Percent Variation Explained:50
Trait name:Shattering

Controlled vocabulary terms associated with the QTL
SourceAccession Number
Plant Trait OntologyTO:0000473

     
Other names for the QTL
Pod dehis 2-1

References for the QTL
Funatsuki et al. 2006Simple sequence repeat markers linked to a major QTL controlling pod shattering in soybean 
Plant Breed. 2006, 125(2):195-197

     
Maps containing Pod dehiscence 2-1
MapLGStartEnd
GmComposite2003_J J46.0952.84See this QTL region in Sequence Browser

Loci positively associated with the QTL
Sat_366LOD_score13.8
Sat_366Favorable_allele_sourceHayahikari

Population types used in identification of the QTL
F6 RIL

Parent trait values associated with the QTL
ParentTrait
HayahikariHigh shatter resistance
ToyomusumeLow shatter resistance

Loci associated with the QTL
Sat_093
Sat_366

Methods used to identify the QTL
Composite Interval Mapping
QTL Cartographer
ZMAPQTL

Comments about the QTL
A second F2 population was also studied to validate the presence of this QTL, which had values of: LOD=16.1, F=49.6, P<0.0001
Publication did not assign an individual name to this QTL; see source publication for more information






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