SoyBase SoyBase transitions to NEW site on 10/1/2024
Integrating Genetics and Genomics to Advance Soybean Research

Phomopsis seed decay 4-1
Parent 1:Taekwangkong
Parent 2:SS2-2
Num loci tested:124
Interval length:3.81
Trait name:Reaction to Diaporthe longicolla Infection

Controlled vocabulary terms associated with the QTL
SourceAccession Number
Plant Trait OntologyTO:0000439

     
Other related QTL's
Phomopsis seed decay 4-2

Other names for the QTL
PSD 6-1

References for the QTL
Sun et al. 2013AQTLs for resistance to Phomopsis seed decay are associated with days to maturity in soybean (Glycine max). 
Theor. Appl. Genet. 2013, 126(8):2029-2038

     
Maps containing Phomopsis seed decay 4-1
MapLGStartEnd
GmComposite2003_C2 C2113.95117.76See this QTL region in Sequence Browser

Loci positively associated with the QTL
Satt460Parent_19.3
Satt460Parent_288
Satt460Phenotypic_R246.3
Satt460LOD_score24.7
Satt460Favorable_allele_sourceTaekwangdong
Satt460Additive_effect-0.2

Population types used in identification of the QTL
F:8 RIL

Parent trait values associated with the QTL
ParentTrait
TaekwangkongPSD resistant
SS2-2PSD susceptible

Other QTLs studied
Pod maturity

Loci associated with the QTL
Satt100
Satt460

Methods used to identify the QTL
MapMaker 3.0b
MapChart 2.1
QTL Cartographer 2.5






Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA
 
USDA Logo
Iowa State University Logo