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Integrating Genetics and Genomics to Advance Soybean Research

Node number 5-1
Parent 1:Pak Chong 2
Parent 2:Laos 7122
Num loci tested:240
Interval length:20.25
Interval LOD score:3.7
Trait name:Node Number

Controlled vocabulary terms associated with the QTL
SourceAccession Number
Plant Trait OntologyTO:0000634
Plant OntologyPO:0005004

     
Other names for the QTL
SN6.1

References for the QTL
Moongkanna et al. 2011SSR Markers Linking to Seed Traits and Total Oil Content in Soybean 
Thai J. Ag. Sci. 2011, 44(4):233-241

     
Maps containing Node number 5-1
MapLGStartEnd
GmComposite2003_C2 C261.9882.23See this QTL region in Sequence Browser

Loci positively associated with the QTL
Sat_153Dominance_effect0.3697
Sat_153Additive_effect-1.003
Sat_153Favorable_allele_sourceLaos 7122
Sat_153Phenotypic_R29.68
Sat_153Parent_218 nodes
Sat_153Parent_116 nodes

Population types used in identification of the QTL
F2:3

Parent trait values associated with the QTL
ParentTrait
Pak Chong 2None given
Laos 7122None given

Other QTLs studied
Oil content
Seed weight
Seed width
Seed length

Loci associated with the QTL
Satt322
Sat_153

Methods used to identify the QTL
Win QTL Cartographer 2.5
JoinMap 3.0
CIM

Comments about the QTL
Parent_1 is Pak Chong 2, Parent_2 is Laos 7122






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