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Integrating Genetics and Genomics to Advance Soybean Research

Locus Type:  SSR


Maps Containing Satt472
Map NamePosition
GmComposite2003_G 94.83
GmConsensus40_G 85.983


Genomic Sequence Information for Satt472
ChromosomeStart PosEnd PosMotifDerived FromPolymorphic*Assembly Version
Gm18 5813623158136341(TTA)37Wm82yesGlyma 1.0
Gm18 5386653653866808(TTA)37Wm82yesGlyma 2.0

*Polymorphic in the following germplasms:
Williams 82,  Noir 1,  Minsoy,  Archer,  Evans,  Peking,  Essex, and   PI 468916


QTLs Associated with Satt472
Corn earworm 9-2
cqSCN-007
Leaflet shape 6-8
Leaflet shape 7-6
Phytoph 13-4
Pod maturity 17-13
Pod maturity 17-6
Sclero 5-9
SCN 37-2
Seed linoleic 5-1
Seed linoleic 6-10
Seed oil 36-6
Seed oil 39-9
Seed oleic 5-2
Seed oleic 6-8
Seed palmitic 7-6


Amplification Info for Satt472
More than one entry indicates that this SSR was independently identified by different labs sometimes using separate methodology resulting in unique primer pairs.
NameSatt472
Primer1GCGAATACATAAAACTCAAATTCAAATCATA
Primer2GCGTTCTATAAATTTCATTCATAGTTTCAAT
Motif(TTA)37
    
NameBARCSOYSSR_18_1708
Primer1GCGAATACATAAAACTCAAATTCAAATCATA
Primer2GCGTTCTATAAATTTCATTCATAGTTTCAAT
Motif(TTA)37
    

References for Satt472
Cregan et al. 1999A An integrated genetic linkage map of the soybean genome Crop Sci. 1999, 39(5):1464-1490






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