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Element ID | RLG_Gmr398_Gm20-1 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Reference | Du et al. 2010 BMC Genomics 2010, 11:113 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Class | I | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Subclass | I | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Order | LTR | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Super Family | Gypsy | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Family | Gmr398 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Description | INTACT | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Chromosome | Gm20 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Start Position | 15433280 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
End Position | 15450037 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sequence | TGTTACGAATGACTCGAGGGGTCTGCAATTAGCAAAGGAACAACAGGAGGAGAGTGAAGTTAGGCCCAAGAGGAGGAAGA AGATACCCATTTACTTGGAAGACTACGTACGAAATGGATAGTAGTCATGCATGGCGCATAAAGCTTGAACCAATTATGTT AGGATCTGTAGAATATTCTAGATGCTGTTAGGATATTCGATGTAAGAGAACTAATTCTGTTAGGAATGTTGGATCTGATT CTCAGTTCTTATAAAAGCTTTGTAATAATTCGTTGAAGGCAATGAAAAAGTTCACTAGTTTCATCTCTCTCTCTCTCTCT CTCTCTCTCTACGTTCTGGAGGCTTCTTGGTCCTCGAATACCAAGAGTAACATTGGTGCTTTCATTGCACAACAATGGCG GACGTGACTCGTTCCAAGGTGTCCGCAGATCGCCTCGAAGACGCAATCGCGAAACTTACAGCGTCTCAACTCGCCATGAA TATGAAAATTGACGATCTTCTTCAGCGTATGTCGCAACTTGAAGCAAACCAACAACCACTGCAAACGCCACCATCTTCTT CGGTAGGACAGACGCCGCCGGTGTACAATCCAATGCATCGTATGAAACTCGATGTTCCAAGGTTCGACGGCTTCGATCCA ACTGGTTGGACCTTCAAGATCACGCAATTTTTTGAGTATCATTCCACGCCGGATTAGGAACGCTTGACAATTGCTTTGTT CTACATGGAAGGGCTAGCGCTCGCATGGTTCTAGTGGATGCACCGTAACGCGTAGCTTTCTTCATGGTCACCGTTTCTCC ATGCTTTGCACTCTCATTTTGCTTCATCCACATATGAGGATCCTACAAGTTTGTTGTGCAAGCTTCAACAACGTTCGTCG ATAAGCACTTATCTAACAAAATTTGAGTCCCTGGCAAATTGCATAGTAGGAATACCAGCTCAGTTTATGATGAGTTGCTT TATCTTGGGGTTGAGTCCCGCCATTCGCCAGGAGGTGCAAGTTCTACAACCAGTCTTCTTGGCTCAAGCAGTGGCGTATG CACGCTTATAGGAGGAGAAACTCCTCGATGCACGTAGGTCACCCACGCAGCATTTTCAATCGGCCACCGTTACAACCACG GCCACGTGATCAACCTCAGTCAACCCCACACCACCATTGTTGCCTACTCCTCAAAGAACCTCAACTCCTTCCATTCCTTT TAAGTGTCTCACATCGGAAGAGCTTGCGATTCGCCGCGAGAAAAGGTTATGTTTTCACTGTGATGAGAAGTTTTCTCGAG GTCACAAGTGTTCACCCTTGTTATTTCTTTTGGTAGGAGAGGATGAAGAACTCACATCAGAGGCGGCCACACCATGATCT CCACCTCCAACTTTGGATTTACTCCTTGAACCTCCTCCGGCACATCTCAGCTTGCATGCCTTGTCTGGCCACTCAGCACC TGAAACTTTACGTATAAAGGGACTCATTGATGAGCTTCACGTCAGCATCTTGATTGATGGAGGTAGTACACATAACTTCC TCCATCACTGTGTCATAACAACGTTAGGCCTCTCACCGTAGGAGATAGCTCCGCTTAGAGTCACGGTGGGTAACGGAGAC GAGATTCATTGTCATCAATTTTGTAGGGCCATTGCAGTACACATTCAAAGGCACTCCTTCACTGTTGACTTCCACATCCT ACCCTTGTGTGGTGTTGATGTCGTGCTAGGGGTGCAATGGCTGAAAACGCTGGGACCAGTACTCACGGATTATACTTCAT TGAACATGAAGTTCATTGCAGGGGGTAAGCTAGTCGAGTTGCATGGTGACCGTGAGAAAGACATGGAACTTGTTTCCCCA TCCCAATTACGTTGTCTGCTTCATACGAATCCCTCCAGCACTTTCTTTCATATTCACATGGAAACTTGCCCTCAATCGTC TCCCACGACACAAGTATTACCAGAAATCACCTCCTTAATCACCAAATATTCTTCATTATTCCAACCACCCACTTCCCTAC CACCATCACGACCGACAGACCACTCCATTACCCTTCTACCAAACACAACCCCAGTGAATGTAAAACCTTATAGGTATCCC TACTATCAGAAACAAGAGATCGAAGATCAGGTGACTGCCATGCTTGTGAAAGGTTTCATTCAACCAAGTTCAAACCTGCT TTCTTCGCCGGTTTTGTTAGTAAAAAAGAAGGATGGAGCATGGAGATTCTGTGTAGATTATCGGGCTTTTAATGCAATCA CAGTGCGAGACCGCTTTCCGATTCCCACGATGGTTGAGCTGCTAGATGAATTTGGAGGGGCACGTTGGTTCTCTAAGCTA GATTTGATGCAGGGATACCATCAAATATTGATGCGCGGGGTTGATATTAGTAAGACTACGTTTCAAACTCATCACAGGCA TTATGAGTTTCGAGTAATGTCTTTCGGCCTGTGCAATGCGCCCTCTTCCTTCCAAGCTACGATGAATAAACTATTTCAAC CACATTTACGCAAATATATCATCATTTTCTTTGATGATATTCTGATATATAGCAAAATGATAGTTGATCATCTCTTTCAC TTAAAAAGCACTTTCCAGATTCTGGTAGTAGGTCAATTCTTGTTAAAGCTTTCTTAATGTATGTTTGCGCAACGATAGTT GGAATATTTAGGTCATGTTATGGCGGGTGAGGGAGTACGACCAGTACCAGAAAAGGTTCAGGCTATTCAGACGTGGCCAA CTCTGCGTTCGCCTCGGGCTCTAAGAGGTTTTCTCGGCCTCGCCGGGTTTTACCGGCAGTTTATCAGAGGGTATGCAGAT CTAGCACCACCTCTTACCAAGCTCTTATGCAATGCTCAGTTTTAGTGGTCTCCCAAAGCTAACGAGGCCTTTCAGAACCT CAAGGACGCTATCACGGCAACCCCTGTTCTCGCCTTACCTAATTTCAAAGTTCCCTTTGTTGTGGAGACGAACGCGTCGG GGTCCGGCATGGGGGCAGTGTTGACGCGGGGAGGCCACCCCATCTCCTTCTTTAGCAAATAGTTTTGCCCCAAGTTAATG GATTCGTCAACATATGTTTGTGAGCTAGCAGCCATCACCGCCGCCGTCAAGAAGTGGTGGCAGTACCTACTAGGGCACCA CTTCACCATCCTAACTGATCATCGAAGCTTGAGAGAACTCATTAACCAGGCGGTGCAGACACCGGAACAACACAGCACTG TTAATTAGCTCGATTGTTGGGTTTTGATTATACAATTCATTTCAGTATCGTTCAGGTCGAGCCAACATGGTGGCTGATAC ATTATCGCGAGTGATGGAAGATTCACCTGCATCTCTTTACTTGTTATCAATGCCTCAGTTTGATTTTTTAGAAGACCTCC GCAAGGAACTGGCGTCTCTACTGACATTCGTGGAGTTGTGCGACCAAATTCAAATTGATCCCACGGCCTACCCAGAATGT ACACTGACTTCGAACCTCATCTTGCACAAGGGGCGCACATGGCTCATTTCTAACTCGTCCATCATCAAGTTGCTACTAGA AGAATTTCACCAATCACCTACAGGTGGCCATATGGGGGTTCAGAAGACGTTACATCATTTGCAGGAGAACTTCACTTGGA GTTTAATTTGAGAGGACACCCGCGCTTTTATCGCAAGTTGCTTGACTTGCCAGCACACCAAATATGACAACCGGAAACCG ACGGGCCTACTTTGTCCTCTTCTGGTGCCGACGCAACCATGGGAAGTTTTGTCAATGGGTTTCATCATAGGGTTGCCTGC TTATCGGGGAAACACCTGCATTTTTGTAGTGGTTGATCGCTTTTCTAAAGGGTTACGTTTGGGCATGCTACCCACTCATC ATACTGCTCACACAGTGGCTATCCTGTTCATGGACATGGTAGGGCGCCTTCACGGCATGACGCGAAGCATTGTTTCAGAT CACGATCTGCTATTCATCAGTAAGTTTTGGAGGGAACTTTTCTCTTTAAGTGGTACTAAGCTTCATCTGATTTCAGCATA CCACCCATAATCGATTGGGCAAACCGAAGTCGCTAACCGCATCATTGAACAATATTTGAGGGCCTTCGTTCACCAAAAAC CTTCAGCATGGGGTCACTATTTGCTATGGGATGAATGGTCCTACAACACTTCGTGCCACTCTACTACTGGCATCACCCCG CTTGAAGTGACCTTTGGCCGGAAACCTCCTAACTTCCCGCACTATATCACAGACACTTCCAAGGTTGACGTCGTTGATGA TATCCTTAGTCAAAGGGAGGCAATGTTCGTGTTGCTTTGCCGCAAGTTAAGTAAAGCTCAAACTCAAATGAAGAAAATGG CAGATAGACATTGCTGTGATCAAGAATTTGAAGTAGGGGACTGGGTTTTGGTGAAACTTAGACCACATAGGCAAACCTCA GCCACAGGTTCAGTTTATTCTAAGCTGGCCAAGAGGTACTATGAGCCCTTCCAAATTACAGCACGCATGGGTAAAGTAGC TTACCAGCTACAATTACCAGACCATTCACGCATTCATTCCGTTTTTCATTCTTCTCTCCTTAAACCCTATGTGGCCATTG CATGTCCGAGAGGCACTGTTGATCTTCCACCTATGGCTTTGGACAATCACCCTGTCGTCACTCCTTTAGCCATAGTAGCG TCCAAACTAATTCCCTCTTAGTCAAGACCAAAACTTATGGTGTTGGTGCAGTGGAAAGGCCTGCCACCTGAAGAAACATC GTGGGAAGAGTGGTCAGACTTTAAGGAGCTTCACCACCTTGAGGACAAGGTGTTGTTTGATGGGCACGAGAGTGTTACGA ATAACTCGAGGGGTCTGCAATTAGCAAAGGAACAACAGGAGGAGAGTGAAGTTAGGCCCAAGAGGAAGAAGAAGATACCC ATTTACCTGGAAGACTACGTACGAAATGGATAGTAGTCATGCATGGCGCGTAAAGCTTGAACCAATTCTATTAGGATCTG TAGAATATTCTAGATGTTGTTAGGATATTCGATGTAAGAGAACTAATTCTGTTAGGAATGTTGGATTTGATTCTCAGTTC ATATAAAAGCTTTGTAATAATTTGTTGAAGGCAATGAAAAAGTTCACTAGTTCCATCTCCCTCTCTCTCTCTGCATTCTG GAGGCTTCTTGGTCCTCGAATACCAATAGTAACA |