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Element ID | RLG_Gmr34_Scaffold84-1 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Reference | Du et al. 2010 BMC Genomics 2010, 11:113 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Class | I | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Subclass | I | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Order | LTR | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Super Family | Gypsy | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Family | Gmr34 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Description | INTACT | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Chromosome | unanchored | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Unanchored Scaffold | 84 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Start Position | 40516 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
End Position | 49902 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sequence | TGTTAGTCGTCTTATACGGCTAACTTTTGTATATAAAATATTTTCCAAAACTTGTATAGTTCCCCAAATTTTTGGTTATT TTGTAGTGATTTTGTAAATAAATCTTGTTTTATTGTGAAAGCTGTCTCTAGAATGTTTCTATTGGATTTAATGATGAAAT ATGTGCAATTTCAGGTGAAAAAGAGGCTAAGTCATGAAGTGTTAAAAGTGACAGTTGAGCTTAGTTCATCAATGGGCTAA GCATAGCTTCAACGCGCTTAGCACAACAGAAGAATCTGGCAGAACATCAATATCAAGGTTGCGCACTAAGTGCGAGATCA GTGTGCTAAGCGCAATGATTGTCTTCAGCAAGGCTCAGCACACGACTAGCGCTAAGCTCACATCCACTTACTCGTGCTAA GCGCGAGGGTGGCGCTAAGCGCAATGTCAGGAATTCAGAGTCTATTTAAAGCCTGTCTTGTGCAGAATTAGGATACACCT GGGGTACAGATTTTGCACAGAATTCCAGAGCACACCACAGTGTCTATTTGGGGAAAAGAGCTTTGGAGGCAGCAAGAGGA GCAGCTTTTGCAGAGATACCTAGGTTTTGTAATCTCATTATTGTTAGGGGTTTTTCTGTAATGGCTGGCTAAACACCCTT GTTAGGGATTTCTAAAGAATAGTTGATGTAATTACTTTAATATCTAATTGATTGTGTTTCTTGTGTTCAATGCTTCTTTC AGTGCTTAAATTTTGTATGCGTTTGGTCTGATCAACCATTTGTGTGCCTGGTTAGGTGACTTTAGCATTGGGAAATGTGT TGTTGCCTTAGAACTTGAATAAAGAAGAATTGAAACTTAGTCTTAAATGAGGGATCTGCGGATTAAGTTTTGGTTTTAAA TGTGTTGTTACAGTAATGTTGTTTGGTCTAAGTCTAGTCCAACAAGAGGGATCTGAGGACAAAGCTTAGGCTAAATTAGT CTAAACTTTCGTAAGCTATTTAAGCTAAGTCTAGTCCAACAAGAGGAATCTGAGGACGAAGCTTAGTTTAAGTTAGTCTA AACCTAGGAGGATTGTCTAAATTAAGCCTAGTCCAACAAGAGGGATCTAAGGATGAAGCTTGGATTGATTCAGTCTAACT AGGGATCGATGTTTAGTAATTTAGGCTACAACATAGAACACAAAAATATGATTGATTAGAGAAACACCTTTATATACATA AGCTGATTTGTTAGAAAGACCCAACATTTTTACCTACTGTTGTCAATTTTACTTACTTGCATTTTTACTGTTTTTAGCCT AGACTTAGTTTAATTCTGTTCTAAATCATCAATTATCAATGTTTCTTTCAACAATGCCTTATTTCTGAATTTAACCTTGT TTAAGACTAGTTCCCTGAGTTCAATACTCGGATTCATCCATTTTAATTTTAAATACTTGACGATTCGGTGTGCTTTCCGG CAAACCAGATTTCCCTTGAACATATTTGCATAAAGAAAAATTGGACCAAAAAGTAACTACAGGGGAAATACAACAAAGTA TTTATGGCGCCGTTGCCGGGGAGCTAGATTCAAGAAGAATTTAGTTCAGTTTTACGACATTGCTTTATATTTTTCTCTTT GATTCATTGATTCTTTTTGTTCATATTTTAGTTACCGTACATTCATTGTTCTTTTGAACTGGATAATTGTTGTTCTATTT TCTTGTATGCAAAGAAGATCTACTGCAGGTGATTTGATTCCCATTGATTTGGAGATTAACGCCACCTGTAGAAGGCATAA TTCAGAGAGAATCATAAATTTTTTGCTGGATTTAGAAGCAGCAACAACTTCAGAAGAAGAACCTCGATCTTCTGAGGCAT CTTCTAGTTTTGCTATTGCAGGGCATTCTCATATAGAACCTGCTGAAGACCCAATCATGGCCAGCTTGCAAAGTAGTTAG CTGAAAGATCATCAAATAGCTTTACAACAAACATAGAGAAAAATCCTAAAGAAGAGTGCAAAGTTGTGATGACTAGAAGC AAAATGGTGATTCAAGCGGAGGAAAGTAAAGTTGATCAGAAGGTGGAGGGATTTAAACAATAGTTGGCTGATGAACTGAC GTTGGAACCGGTTGATGATTTAATTGAACTTGAAGAAATTATTGAGGAAGCAGAAGGTGATAAAGAAGGAGAGACACCAA TAAAAGACTGTCAAGAGAAAATAAAGAAGAAGGAAGAACAAGAAAAAGAAAAAGAAGAAGAAATAAAAGAAAAAGAAAAA AAAGAAAAAAAGTTGAAAAGTGAAAAACAAAAAGAGAAGGTTGTTGAGACTGAGAAGAAGAAAAGCAAGAGTGAGACTAA CATAGAAAAGAAGAAAGAGGCTACTCCTATTGAATGCAAGGAGGTACCTTATCCGTTGGTACCCTCCCGGAAAGATAAAG AGCGACATTTGGCTAGATTTCTTGATATCTTCAAGAAACTGGAAATTACTTTGCCATTTGGAGAAGCACTTTAGCAAATG CCCTTCTATGCCAAATTTTTGAAGGATATGTTAACCAAGAAGAACCGGTACATCCATAGTGACAAAATTGTTGTGGAATG TAACTGTAGTGCTGTTATTCAACGCATTCTTCCACCCAAGCATAAAGATTCGGGAGTTGTCAGAATATCGTGTTCTATTG GTGAGGTTGTTGTAGGCAAAGCCCTTATAGACTTGGGAGCCAGTATCAATTTAATGCCTCTTTCTATGTGCCGGAGACTT GGAGAGATAGAGATAATGCCCACACGCATGACCCTCCAGTTAGTTGACCGCTCCATCACATGGCCATATGGAGTCATTGA AGATGTTTTGGTGAAGGTTAAACACCATATATTTCCAGCTGATTTTGTTGTCATAGATATAGAAGAGGGTGTTGGCATTC CTCTCATTCTTGGCCGCCCATTCATGTCTATTGCAAGCTGTGTAGTAGACATGGGAAAGAAGATGTTGCAGATGGGCACA GAAGATCAGAAGATCAACTTTGATTTGTTCCATGAGGACAAAGATCCACCTAGCCAAAATGTTTGTCTTAAAGTGCATGT GATGGAGGAAAAGAGACTTGAGAAGAAGGTCCTTGAAGTAGGAACTCTGTTGGATCTTGGATAACAGGACGATGCGTCAA GCTAGTGACGTTAAAAGAGCGCTTACTGGGAGGCAACCCAGTTTTTCTTTCCCTTTCCTATTTTTCATTCTTATCTCTTG CATGTAATTAGGATACCTTGCTTGTGATTGTGATTAATTTCAACTGGTTTAGTAATGAACAAGGGATTTTAAGCTTGTGT GAAGAGATAGACAGAAAAAGACTTAGAAATTTTTTGCAATTGTCTATCCGCTAAGCGCCATGTCTTCACGTGTTAAGCCG AGCTTGCTCGCACTAAGCACACAGACCCCTGATTGGTTGGCCGAATAGTTCAGCTAAAGGCACATCACTGTGATAAGCCC CACATCTTCACGGTAATTGAACTTTAACTAGTGGGCTTAGCGTGGATGATGCGCTAAGCGCCACTTCTTCTCTGGAAAAA TTTTATTGTAGCAGCGCTAAGCGCGCTATCCTGCGCTAAGCCCCAAATCCATTTTGTAACTTGAGTTTTTAAGCTGGGCT TAGCGGGCCAGGAAGCGCTAAGCGCCAACCTCTTACGGGTTTTGAATTCTTGGAAGTGCGCTTAGCACGCCTGTTGCGCT AAGCCTGAATTACTCTCTGTAAGTTGAAGATTGATGGTACGCTAAGCCTCACATCTCAGGCTAAGCGCATATTGTAGAAA AAATTTTGTGTTGCAAAAAGCGCTAAGCGCAGTCTGCTGCGCTAAGCCCCAGATGCTCATGGGACTTTACAACTTCAAGT TGGGCTTAGCGCGAGGCTAGGCTAAGCGCTTGGGTTTTAAACTCAAACGTCATATGGGCACGCTAAGCGCAGTTGTGCGC TAAGCGTGCCATACGAATTTCAGTTTTTAAAAATCAAAGGCAGAGACACTTTGGGTACTACCTTTGCACCCAAACCTCTG CACCTTCCTAACCTTGAGCAATTGTGTACTTTCTGCTTCGTGTGTACTGCTTGTCTGCATCTTCATTGCTTCATTTCAAG AACAATCCAAGTAAGTTAGTACATTTCTATTTTTATTTTTCATTCTTTAAACCTTAGGATAGATGACTTCTTGTTTTCTT AGTTGTATGTTGTTAGGTTAAGGTTATTAGTTTTAGGGTTAGTCAATGTAGGATTTCAGGTAACTTAGAAGCCCATTAGG GGAAATGTGGCTGAAAGGTGTGAAGACCCATGTGATTCTGTTTGGAAATCGCAATGAACGCGCTAAACGGACCATGTCGC GCTAAGCGTGTTTATCCCTGTTGATGAACGTAAGTGATGAGCCCGCTAAGCGTGTTTGTGCGCTAAGCGGGACTAGTGTT CAGACATTAAGATTTAGAGAATTTTTGTTCAGCGTTAAGCCTGACCTGTCAAGCTAAGCGCCATTTTGCTTCTGTAAGTT TTCCTTTGAATAAGGCTAAGCGCGTTTATGCGCTAAGCCCTTGTTGTGTGCTGAGCTAAGCACCCTGCTGCGCTAAGCTC AACTCTCTCACTATCTTTTAAGTTTTTGTAGTTAGGCTAAGCGCGCCTTATGCGCTAAAGCCTGAGTGTCATTCTGATGA GGCTGAGCTAAGCACGACATGCTACGCTAAGCTCCAACTCTCTTCGATTTTGAAAATTGTAGACTTAGGTTAAGCTCAGT TGTGCGCTAAGCCTATTCTGCAGAAAAAAATATTTTTTGTGTCTTCGAGCTAAGCACCAGCCTGCTGCGCTTAGCGCCTG AGTAAAATTTCATAAGGCGCACTAAGCTCAGCCTGTTGTGCTAAGTGCCCAGCCAAAATTTCAATTTTATTTTTATGTTT TTGTGAAAATATCCTGTGCTAATCTCTTGTGTTTTGTCTTATCTTTTACAGATGACATCTAAGAAAAGGAAAACTCCTTC TACACCTACCCAGGCCAGATTTGATAGATCCAGGTTCACATCCCAAGAGGCTTGGGAGAGATATACAGACATTGTGGTGC CTCGAAAGCTACTACTGAAGAGGAATGTGGTAGTTTATTGCACCGAGTTTGACGAGTTCAAGAAGGAACTTGAGATAAGA CATTGGGATGAGAAGTTGACTGATTTTGCTGACAGTAGTATAGACATTGCCATTATGAAGGAATTTTACACCAACCTCTA TGACCCCGAGGATAAATCACCTAAGCAAGTGAGGGTGAGAGGTTACTTAGTGAAATTTGATGAAGATACTCTGAATACAT TTCTGAAGACCCTGGTAATTTTGAAGGAGGGGGAGAATTTGTGTACTTATTCCAGGTTTGCACTCCTGAGGTCTGATCCT CAGGAGTTGGCTGCTAAGCTTTGTATCCCAGGGAGGGGATTCACACTTAATGTTGATGGGCAGCCTTTGAAGATACTGAG GAAGAACATGACCACTCTAGCTCAAACATGGAGTGTTATTTCCTTTTCTAAGCTGATTCCTACCTCCCACACATCTGATG TGACCTTGGACAGAGCCAAGTTCATTTGTGGTATCATTGTGAAGATGGATATGAATTTGGGGTACCTTATCTCCCACCAG ATCTCTCTTATTGCACAACATGATACATCCAGACTTGGATTACTTGCCTTTATCATAACTCTATGTAAGGCCAGAGAAGT CCAATCAGATTCTAGATCCCTAGAGAACTTGAGCCCTGCCATTAACTTGGCATATATTAAGAAGAACTGTTTGAATCTTG ATGATCCAACAGTGACATTTAGAAGGCCAAGGAAGGCCAGGGGTAAGAGATCAGAGGTCCCCACTACTTCAGCAGCACCA GAGACACCAACTCCTTCTTCTTCCATAGCTCCAGTACCTCTCATTCAGACTCCAGCTATTCCTCCAGCATCTACACAGAT ACCACTTCCAACTCCTTTATCTGTAGGACTTTCAGATTTTTCATTTACACCACAAATGCTGCACTCCATGCTCCAGAGCT TACACAGGGGGCAGTCCATTATCATGCAGAGCCTTCAGGGCTTGGGCTTGCCATCCGTTATGAGCATGGATGAGTTTGAT GCACAGGTGGCCTGGCCAGGAGCCCAACCTTCTCCTTTTGGAGGGGGTGGGGCCTCTGCAGCTCAGGAGCCTGAACCAGA GGAACCAGCAGTAGCAGCAACAGAGGGAGAGGATGAGCTCACCCCTCCTGAGCCCTTTTATTTTGATGCAGGTGTACACA TGGCTCAGGAGGAGGAGACTTCCATAGACTAGATCTCAGAGCCATCCCCATCATCCATACCTGATGATGCCATACCATCT GCACCAGTATCTAAGTTAGAGCAGCCTATCTCTCAAGATTCACCAGCTGCTCAAGTTTTGGATCTTAATGAGCATGCACA GGAGCAACCACAAGAGCAAGACATTTAAATTTGTGCATTTTGAACATTTTAGTTTATTTTCAGCTATTTTATGATTTATG TTCAGTCATTTTAATTTCAGTTTTTACGTTTTAGTTCTTTAAATTTTAGTTATTTAAATTTCAACACTTTGAGTTGTTTG CTTGTACCAAAAAGCTTGTTTGAACAGTGAATTGATTGAAAATGATATGTAGTGGATTATTTTGTATGAAATGAGTGTTT GAGAATGATTTGAATGAGCAATTGTATGATTTGAGTGGATTGGAATTATTAGATAATTGTTTTGATCAAGCTTGTAGCCA TTAGAAGTGAATGAGCATGTGATTAGAAGTATGACTGAAAATGCTAGTCAGTTTGTCAGATTGATTGTGAAGGAATGCAT TAACCGTATCCCAGTGAGAGTGCGATCCTTAAATTTTGAGAGAAGCAACTATCATTTAGTACTGATTTTTGCGTGAATCT CTGAAGTATGGACTGAATGCATGAAATTGAGGATGATGAAGGCCATGTTTGAGCCACTTAGCCAAAAAGTCGACCATGCG CTTGAATGAATTATCCCTTGTACCCAATTTGAGTTGAATGAATTATTGATTGATTGAACCTTGAGCCTATACAGTGTTAT CTCCTGCTACTTGACTTAGGTTGTAGGAGAGCATCATCCATAGGAAGCGTGGTTCAAAGCAAATTTGTCCCAAATTTGGG GGAGTAATTATCAAGGTAAATTTGTTTCAAATTTGGGGGAGGCACTGGGTAAGAATTGAAATGGTCAAAGTAAATAGCAT ACACACACTATTTTTGTATATACACATAATGTCTCTGTATATATTGTGTTAAAAAAACTGTAAATACAAATGAAATTAAT AAGTGTATATGTTGCAAAATAATGAAATGAAGCTGAGTGCCTAAATAAAAGGCAAATATGGGGTGTGAATGAATGAAAAA GTGAAGGTTTATCTTTGGATGAATGCTCTCCTAGAACCTAAGCTTTTGAATCCTTGAAAAACCATGATTTTGTTGGTAGC CTAACCCCATTATAAGCCTAGAAAGTCTTTCGGATTCATTTTGTGTGTTCATTGTTGTATGATATGAGATGAAATGCAAA GGTTGGGACTTGTGCTAGTTGTTTATGATGGAATGAGCCTAAACACTTGAGCTTGAGTGAAACAATGACTGTGAGGTTTG GGTTGATGATCCTTCCTTGATGTCTGCTATCCTTACTAGCTTATTTCAATTGTGACTCTAATGTGTATGTTCTTATCTTT GAAAAGCTGCATGTTTGTGAAAATCAATTGATTGAAGCATGTCCATGATATTCAGTTCATATGGTTGAATTCTCTGTGAA GAAAACACCATTTTGAGTGATCACTGTAGTTTGTCACTTGAGGACAAGTGAATTGTTCTTTCTTTGCTTGAGGACAAGCA AAACTGTAAATTTGGAGGAGTTTGTTAGTCATCTTATACGACTAACTTCTGTATAGAAAACATTTTCCAAAACTTGTATA GTTCCCCCAATTTATGGTTATTTTGTAGTGATTTTGTAAATAAATCTTGTTTTATTGTGAAAGCTTTCTCTAGAATATTT CTATTTGATTTAATGATGAAATATGTGCAATTTCAGGTGAAAAAGAGGCTAAGTCATGAAGTGCTAAAAGTGACAATTGA GCTTAGCTCATTAGTGGGCTAAGTGCGCATCTATCGCTAAGCGCAGCTTCAGCGCAACAGAAGAATATGGCAGAGCATCA ATATTAAGGTTGTGTGCTAAGGGCGAGATTAGTGCGCTAAGCGCAGCGGTTGTCTTCAGCCAGGCTCAACGCACGACTGG CGCTAAGCTCACATCCACTTATTCGCGCTAAGCGCGAGGGTGGCGCTAAGCGCAACATCCCGAATTCAGAGCCTATTTAA AGTCTGTCTTGTGCAAAATTAGGGTACACCTGGGGTACAGATTTTGCACAGAATTCCAAAGCACACCACAGTGCCTATTT GGGGAAAAGAGCTTTGGAGGCAGCAAGAGGAGCCAGCTTTTGTAGAGATGCCTAGGTTTTGTAATCTCATTATTGCTAGG GGGTTTTCTGTAATGGCTGGCTAAACACCCTTGTTTGGGATTTCTAAAGAACAGTTGATGTAATTACTTTAATATCTAAT TGATTTTGTTTCTTGTGTTCAATGCTTCTTTTAGTGCTTAAATTTTGTATGCTCTTGGTCTGATCAACCATTTGTGTGCC TGGTTAGGTGACTTTAGCATTGGGAAATGTATTGTTTCCTTAGAACTTGAATGAAGCAGAATTAAAACTTAGTCTTAAAT GAGGGATCTGCGGATTAAGTTTTGGTTTTAAATGTGTTGTTACAATAATGTTGTTTGGTCTAAGTCTAGTCCAATAAGAG GGATCTGAGGATAAAGCTTAGGCTAAATTAGTCTAAACTTTCGTTAGCTATTTAAGCTAAGTCTAGTCCAACAAGAGGGA TCTGAGGATGAAGCTTAGTTTAAGTTAGTCTAAACCTAGGAGGACTGTCTAAATTAAGCCTAGTCTAACAAGAGGGATCT GAGGACGAAGCTTGGATTGATTTAGTCTAACTAGGGATCGAGATTTAGTAATTTAGGCTACAACATAGAACACAAAAGCA TGATTGATTAGAGAAACATCATTATATACATCAGCTGATTTGTTAGAAAGACCCAACATTTTTACCTACTATTGTCAATT TTACTTACTTGCATTTTTACTGTTTTTAGCCTAGACTTTGTTTAATTCTGTTTTAAATCATCAATTATCAATATTTCTTT CAACAATGCCTTATTTCTGAATTCAACCTTGTCTAAGACTAGTTCTCTGAGTTCAATACTTGTATTCATCCATTTTAATT TTAAATACTTGACGATTCGGTGCGCTTTCTGGCAAACCAGATTTCCCTTGAACATATTTGTATAAAACAAAATTGGACCA AAAAATAACTGCAGGGGAAATCCAACA |