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Element ID | RLC_Gmr50_Scaffold70-1 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Reference | Du et al. 2010 BMC Genomics 2010, 11:113 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Class | I | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Subclass | I | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Order | LTR | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Super Family | Copia | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Family | Gmr50 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Description | INTACT | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Chromosome | unanchored | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Unanchored Scaffold | 70 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Start Position | 84634 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
End Position | 96475 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sequence | TATTAGGAATTTTATAATTCCTAATTAATTAATTAGTGTGGGCTACATATTATATTTATCATTTATATTAGTTATTTACA TTTATGGGCTCAATAAAAGTGATCTAATTTGGTGAGCCTATTGGACTATCATCAGAAATTAATATGGGCTTGATAAGCGG AAACCAGTTTGGCCCGTTAGGGAATAATGGGAACTCTAACAGGTTAAAACATAAAGCAAGGTTGTGGTCCCCAAGACACC AAATCAGAAATTGTATTATCTCCTCCCCATCTGAAGAGAAACCTAAGGTCCCAAAAGGAAAACGGTGATTTGGTTGAGGA AGAACACAAAACCAACAGTTCCTCATACTCATCAATTCCGCTACTTATCATGGATCCAGGTATTTTTCACAACCCCTCTT GATAATCTAACGTAATGCGTTTTCAGTGATTATTGGTATTTTATTAAGATCCCTAAAATGCCAAACAAGTGGTATCAGAG CCAGGTTATTATTAGATTATTGGGAATTAAAGTTATTTGGTTTGTGTTATACCTGTATTATTTTGTTACATGAACCCTAA TTTTATTTTGGGATTTTATCTTTGCAAATATAATTATGATTGTAAATTTGGATTTTTTTTTTCTTTTCGACCACGATATA ATAATCATCATATGCACGTTCATGTTTTGCATTCGGATTCCATGAGAAAAAAAACTATTTTTTTTCTCGCTCGAGAATAG TCATCCATTTTTGTTTCTCGTTCACGTGTTTGTTTTTTTTTATGGTTGTTGGTTTTGTTTCCTTATGCATGCCATGACAT GATATACATGTGATACATAATCTTTGGCTTTATTATATCATCATAAGAAAATCCATGTTGCGTATCGTTAAATGCAATTT GGCTTTTGCATTTTATTTTTGTTTTCCTTGTTTTTATTTGTGAATTATGTGTATTAATTGGTGAATTCCATTATGTTTTG GTGTAAATTTAGAAATTACAAACCCTCGTATTATTCCTTTTTATATCTGGTAATTTTGATTGAGTTGATTGAAACAATAT ATTGTCAAAGCAATCTCTATTGTGTAAATTAATTTAATTAAAATTGCATAGATATTAGTATAAAACTATTTATGCAAATT GTGCTCAGCCTAAAGGAAGACACAATTTGGCCAAATAATTTTGTACCTGTGATGATAAATGTATGACAATTAGAAGGTAT TTTCATGTGAATTATAGTTGGTCCAAAGAAAGACTATGATTTGATAGAATTTATTGTCAATATTTGATCATTGTGTTAAG AGTACCAATTACAAATTAATTTCTCTATCCAAAGACTATGAATTAATGTTGTGCTAGGTATCTTGTGATGAGTTTGTTAT GTGAACTATTTTGCACATGTCTTGTTATATATATATATATATATATATATATATATAACTTATTGACTTATTTGTGAGCA TGTAATTTTTTTATTATTATTATTCAGTTTTTGTTGCTAGTGCTGCAAATGTATCTACTCAAGTGAACGGTATCCCTATG CTGAATGAGACAAATTTTAAGGTCTGGAAGGAAGCCATGGAAATTGTTCTCAGCTGTATGGATTTGGATTTGGCACTGAG NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNGAGATGAGTACCTTTTGCTAAGCTCATGTCCATGAAGTATAATGGCAAAAGTATATAGGG AGTATATAATGGAAATATCTAACTTAGCATCTAAACTGAAAGCACTTAAGTTAGAGCTTGGTGAAGACCTGCTCATGCAT TTAGTTTTGATCTCACTTCCTGCACACTTTGGGCAATTCAAAGTGAGTTATAACATTCACAAGGACAAATGGTTCCTTAA TGAGCTTATATCTCACTGTGTGCAAGAGGAAGAGAGGCTGTAGAGAGATAGATCTGAAAGTGCTCATTTAAGCTCCACCT CTTAGAATAAGAAAAGAAAGAAAACTAAGGGTGTTGTTGAAGGGTCTTCTCAGCAAAAGAAACCAAAGAAGGATGAGGAA TTTACCTGCTACTTCTGCAAGAAGTCTAGACACATGAAGAAAGAGTGTCCCAAGTATGCCACATGGCGTGTAAAGAAAGA TAAATCTCTTGCTCTTATTTGTTCTGAAGTTAATTTAGCTTTTGTACCTAAAGATACTTGGTGGGTAGACTCTGGTGCTA CAACTCACATAAGTGTAACCATGCAGGGTTTCCTGTGCAGCCGACTGCCAAATGATGATGAAAGATTCATATTTGTTGGC GATGGCAAAAAAGGTTGCGGTGGAGGCTATAGGAACTTTTAGATTGTAGTTAAAGACTGGATTTTATTTGGATTTGTTTG AGACTTTTGTTGTACCGTCTTTTAGACGGAATTTAATTTCTATTCTAGTTTGGACAAATTTGGTTTTTCTTGTTCATTTG GAAATAATAAAGTTAGTCTCTATCAGAATTCGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGCCAAGTAAAATTGTTAATAAAACCCTTATGAACTTTGGACTAGCAAAAA GCCAAGCATTAAGCATATGCATATTTGGGGTTGTCCGGCTGAGGCATGGCTTTATAGGCCACATGAAAGAAAGCTAGATT CAAGAACAATTAGCTGCTATTTTGTTGGCTATATTGAACGCTCTCGGGGTTATAAGTTTTATGATCCCACTTTAAGATCA ATATTTGAAACGGGAAATGAAAGATTTCTTGAGGAAGTTGAGTTTGGGAAGGAAGAAAACATAAGGAAAGTTGTCTTTAA GGAAGAACCTGTTATTGACAGTGCTCAAGTCCTCATACCTATTGTTGTTTAAGAAATAAATCCAGTAATAGAAAACAATG TTCAAACTATTGTTGATGACATTGTTCAAGAACAAGACAATGATAAGGTTCTTCCTCAAATACCTATACAGCAACCTCAA CAACCTCAAGAAGTGTCATTAAGGAGATCTGATAAAGAAAGGAGAAGTGCAATCCCTGATGATTATATTATCTTTCTCCA AGAACATGAGGATGGCATTGGTTTAACAAAGGATGATCCGATTAACTTTTGTCAAGCCATGTGTGGTTCTAACTCTCAAA ACTGGATCAACGCCATGAAGGATGAGATGAAATCTATGCAAGGCAATGACGTTTGGGATCTCGTCGAATTTCTTGAAAGA GTGAAACCTATTGGTTGCAAATGGATATTTAAAACCAAAAGGGATTCAAAGGGCAATGTTGAGAGATATAAGGCTCGTCT AGTCGCTAAAGGATTTACCCAAAAGGAAGGCATTGACTATATAGAAACTTTTTCTCCAGAATCTTCAAAGGATTCTTTTA GAACAATAATGGCACTAGTAGTTCATTATGATTTAGAGCTACATCAGATGGATGTTAAGACTGTGTTTCTAAATGGTGAC ATTGAAGAAGCAATTTATATGATGTAACCAAAAAACTTTGTATCAGGTGACTCAAAGTCTATGGTTTGCAAACTAAATAA ATCTATCTATGGTTTGAAACAAGCTTCCCGTCAATGGTATTACAAGTTCCATCAAGTCATTACCTCATATGATTTTGAGG CAAATGTAGTTGATGATTGTGTATACCACAAGTTTAGTTGGAGTAAACACTCATTCTTGGTGTTATATGTCGATGATATA CTATTTGCTAGCAATGATATAAGTTTCTTACAAGAGACTAATAAATTTCAGACGAAAAATTTTGAGTTGAAAGATCTTGG GGAAGCCTCTTTTGTATTAAGAAGCAAGATACTAAGAGATCGCTTTCAAGGTATCATAAGGTTGTCACAAGAAAGTTATA TCGATAAGGTCCTAGATAGATTCGGCATGAAAGATAGTAAACCAAGAGATACCCCGATAGCTAAAGGAGACAAATTTAGT CTCAAACAATGCCCTAATAATGACCTTAAAAGAATAGAGAAGCAAAAGATTCCTTATGCATCAGCAATAGGAAGTCTAAT GTACGCTCAAGTTTGCACTCGTCCCGATATAACATTTGTAGTAGGAGTTCTAGGTAGATATTTGAGTAATCCTGGAATGC AGCATTGGAAAGCATCAAAACGTATGATGTGTTACCTAAAGAGAACAAAAGGATACACACTCACTTATCAGAAGTATGAG AATTTGGAGATCATTGGGTACTAAGACTCTGATTTTGTTGGATGTCAAGATAGCAAACACTCCACATCTGGATACATATT TATGCTGGCTGAAGGAGCTATCTCTTGCAAGTCTGCTAAATAGACTCTCATAGCTTCTTTGACCATGGCCGTGAAGTTCA TTGCTTGTTTTGAGGCATCCAACCATGGGATATGGCTGAGAAATTTTGTCACTGGTTTGTGTGTGGTTGACGGCATTGAA AGACGATTAAAGATTTATTGTGACAATAACTCAACAGTTCTTTACTCCAACAACAATAGGAGTGCAACCAAATCAAAGTT TATTGACATCAAGTTTTTGGTTGTTAAAGAAAGAGTTCAGAATAGACAGATTTCCATAAAACATTTAAGGACTAATGATA TGCTAGCTGACCCACTTATGAAAGGTTTGGTACCTAATGTTTTTCATGAGCACACTGCCCATATGGGAGTGATTCCTTAT AGTACCTTAGTTTAGTAGGAGTCTCATTTATGTTCTATATATGCCTTATGTTGTTCAGATATTTGTATAGATTGATTTTC TATCAAATAAAGTTGAAGGTTATCATTTCATTCTAAGCTTGTTCTGTTTGCAATATTTATATTGTGTTTGGATTGATCTC TATAAAGAATAAAGTTTGGACTAATTGGAAATGAACATGAATGAGATCACATTGTAGAAGTAAGATATTTTGATGTTTTG ATGATGCCAAAGGATCAAGTGCTTCTCAAGTTTTATTCAAGAATGGAATCCAAGAATCCAAGAAAATCAAGATATATGAC ACATTGCATGTTATTTTCATGTTGATTATCCATATTTCATCTATGTCATCAAGTATATGTGACATTGGTGATCATTGTGG CTCAATCACGTTGGATTGTGAGGAAAACTGCAATGGTTCTGTGTTACTATATAAGATGGACCAGATTGTTTAAGGAAAGT CTAAAAGTAAATAACATACGGTTGCGCGTCTAAAGACTTTTGCAATATAAATGATTAAGGTTAATATAAAGCTCAAGTGG AAGATTGTTAGGAATTTTATAATTCCTAATTAATTAATTAGTGTGGGCTACACATTATATTTATCATTTATATTAGTTAT TTATATTTATGGGTTCAATAAAAGTGATCTAATTTGATGAGCCTATTGGACTATCATCAGAAATTAATATGGACTTGATA AGAGGAAATCAGTTTGGCCCGTTAGGGAATAATGAGAACTCTAACAGATTCAAACCTAAAGCAAGGTTGTGGTCCCCAAG ACACCAAATCAGAAATTGTATTATCTTCTCCCCATCTGACGAGAAACCTAAGATCCCAAAAGGAAAATGCTGATTTGGTT AAGGAAGAACACAAAACCAACACAGTTCCTCAGGTTCATCAATTTCGCTGCTTATCATGGATCCAGGTATTTTTCACAAA CCCTCTTGATAATCTAATGTGATATGTTTTCGGTGATTATTGATATTTTATTAAGATCCCTAAAATGTCAAACA |