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cqSCN-005
Parent 1:Hartwig
Parent 2:Flyer
Heritability:95
Num loci tested:144
Trait name:Reaction to Heterodera glycines

Controlled vocabulary terms associated with the QTL
SourceAccession Number
Plant Trait OntologyTO:0000384
Gene OntologyGO:0009624

     
Other related QTL's
SCN 41-1
SCN 41-2
SCN 41-3
SCN 41-4
SCN 41-5

References for the QTL
Kazi et al. 2010Iso-lines and inbred-lines confirmed loci that underlie resistance from cultivar 'Hartwig' to three soybean cyst nematode populations 
Theor. Appl. Genet.

     
Maps containing cqSCN-005
MapLGStartEnd
GmComposite2003_D2 D287.0189.01See this QTL region in Sequence Browser

Loci positively associated with the QTL
Satt543Parent_12 Female index
Satt543Parent_2103 Female index
Satt543Phenotypic_R212
Satt543P_value0.0005
Satt543Favorable_allele_sourceHartwig

Population types used in identification of the QTL
F5:7

Parent trait values associated with the QTL
ParentTrait
HartwigSCN resistant
FlyerSCN susceptible

Other QTLs studied
Seed yield

Loci associated with the QTL
Satt543

Methods used to identify the QTL
Mapmaker/EXP 3.0
ANOVA

Comments about the QTL
QTL was also detected in a Near Isogenic Line (NIL) for confirmation. See publication for additional information
Publication determined SCN resistance by Female Index, which was calculated as the number of cysts or females on a given plant divided by the mean number of the same on a susceptible cultivar
QTL was detected for resistance to HG Type 1.2.5.
Parent_1 is Hartwig, Parent_2 is Flyer
The Soybean Cyst Nematode ( SCN ) disease is caused by Heterodera glycines.






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