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Seed isoflavone 3-1
Parent 1:Magellan
Parent 2:PI437654
Heritability:0.95
Num loci tested:451
Interval length:3.7
Trait name:Seed isoflavone content

Controlled vocabulary terms associated with the QTL
SourceAccession Number
Plant Trait OntologyTO:0000290
Plant OntologyPO:0009010

     
Other related QTL's
Seed isoflavone 3-2
Seed isoflavone 3-3
Seed isoflavone 3-4

Other names for the QTL
qTOT5

References for the QTL
Gutierrez-Gonzalez et al. 2011Major locus and other novel additive and epistatic loci involved in modulation of isoflavone concentration in soybean seeds 
Theor. Appl. Genet. 2011, 123(8):1375-1385

     
Maps containing Seed isoflavone 3-1
This QTL could not be placed on the Composite genetic map. See comments below for more information.

Loci positively associated with the QTL
The locus associated with this QTL could not be placed on the Composite genetic map. See comments below for more information.
LocusParameterValue
BARC-060051-16321Phenotypic_R237
The locus associated with this QTL could not be placed on the Composite genetic map. See comments below for more information.
LocusParameterValue
BARC-060051-16321P_value0.05
The locus associated with this QTL could not be placed on the Composite genetic map. See comments below for more information.
LocusParameterValue
BARC-060051-16321Favorable_allele_sourcePI437654
The locus associated with this QTL could not be placed on the Composite genetic map. See comments below for more information.
LocusParameterValue
BARC-060051-16321Additive_effect244

Population types used in identification of the QTL
F7 RIL

Parent trait values associated with the QTL
ParentTrait
MagellanLow isoflavone level
PI437654High isoflavone level

Other QTLs studied
Genistein content
Daidzein content
Glycitein content

Loci associated with the QTL
BARC-041257-07953
BARC-060051-16321

Methods used to identify the QTL
BeadStudio 3.0
Carthagene 1.0
QTLNetwork 2.0
CIM

Comments about the QTL
Neither marker (BARC-041257-07953, BARC-060051-16321) reported as flanking this QTL is on the SoyBase Composite genetic map. Thus the QTL does not appear in the map display. See the publication for additional details
Publication used a minimum LOD score of 9.0 for determining QTL, but did not provide a LOD score for each QTL; see publication for additional details
Publication measured isoflavone content as micrograms of isoflavone per gram of seed






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