Seed Cys 5-1

Parent 1:
Parent 2:
Num loci tested:	1536
Interval length:	11.01
Interval LOD score:	5.35
Percent Variation Explained:	16
Trait name:	Seed cysteine content

Controlled vocabulary terms associated with the QTL

Source	Accession Number
Plant Ontology	PO:0009010
Gene Ontology	GO:0019344

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References for the QTL

Ramamurthy et al. 2014a

Identification of new QTLs for seed mineral, cysteine, and methionine concentrations in soybean
Mol Breeding. 2017, 34:431-445

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Maps containing Seed Cys 5-1

Map	LG	Start	End
GmComposite2003_I	I	62.91	73.92	See this QTL region in Sequence Browser

Loci positively associated with the QTL

BARC-038869-07364

Additive_effect

-0.013

Population types used in identification of the QTL

F5 RIL

Other QTLs studied

Seed cadmium

Seed nickel

Seed Met

Seed Met plus Cys

Seed weight

Loci associated with the QTL

BARC-038869-07364

BARC-039753-07565

Methods used to identify the QTL

MergeMap

QTL Cartographer

Comments about the QTL

The trait measured was seed cystein content. QTL detected using joint linkage mapping between three populations, Williams 82 x DSR-173, Williams 82 x NKS19-90, and Williams 82 x Vinton 81.

Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA

U.S. Public Domain