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SCN 8-1
Parent 1:Essex
Parent 2:Forrest
Num loci tested:131
Percent Variation Explained:4.2
Trait name:Reaction to Heterodera glycines

Controlled vocabulary terms associated with the QTL
SourceAccession Number
Plant Trait OntologyTO:0000384
Gene OntologyGO:0009624

     
Other related QTL's
SCN 8-2
SCN 8-3
SCN 8-4
SCN 8-5

References for the QTL
Chang et al. 1997Association of loci underlying field-resistance to soybean sudden-death syndrome (SDS) and cyst-nematode (SCN) RACE-3 
Crop Sci. 1997, 37(3):966-971

     
Genes associated with the QTL
Rhg1

Maps containing SCN 8-1
MapLGStartEnd
GmComposite2003_G G10.6012.60See this QTL region in Sequence Browser

Loci positively associated with the QTL
OG13_490Parent_13.4
OG13_490Parent_22.7
OG13_490Phenotypic_R20.040000
OG13_490LOD_score1.200000
OG13_490P_GT_F0.056000

Population types used in identification of the QTL
F5:11 RIL

Parent trait values associated with the QTL
ParentTrait
EssexSusceptible
ForrestResistant

Other QTLs studied
Sudden death syndrome resistance

Loci associated with the QTL
OG13_490

Gene associated with the QTL
Rhg1

Methods used to identify the QTL
ANOVA

Comments about the QTL
A Candidate_gene maps within 10 cM of the QTL. A Putative_candidate_gene is linked to the QTL, but more than 10 cM from it.
The trait is resistance to Soybean Cyst Nematode ( SCN ) disease which is caused by the nematode Heterodera glycines. Study done by analysis of variance at locus; for purposes of display this was converted to an interval around that locus.






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