SoyBase SoyBase transitions to NEW site on 10/1/2024
Integrating Genetics and Genomics to Advance Soybean Research

SCN 3-1
Parent 1:PI437654
Parent 2:BSR101
Num loci tested:356
Trait name:Reaction to Heterodera glycines

Controlled vocabulary terms associated with the QTL
SourceAccession Number
Plant Trait OntologyTO:0000384
Gene OntologyGO:0009624

     
Other related QTL's
SCN 3-2
SCN 3-3

References for the QTL
Webb et al. 1995Genetic mapping of soybean cyst nematode race-3 resistance loci in the soybean PI 437.654 
Theor. Appl. Genet. 1995, 91(4):574-581

     
Genes associated with the QTL
Rhg4

Maps containing SCN 3-1
MapLGStartEnd
GmComposite2003_A2 A247.8049.80See this QTL region in Sequence Browser

Loci positively associated with the QTL
IPhenotypic_R20.090000
ILOD_score5.800000

Population types used in identification of the QTL
F6:7

Parent trait values associated with the QTL
ParentTrait
PI437654Resistant
BSR101Susceptible

Loci associated with the QTL
I

Gene associated with the QTL
Rhg4

Methods used to identify the QTL
Maximum-likelihood analysis
Interval mapping

Comments about the QTL
A Candidate_gene maps within 10 cM of the QTL. A Putative_candidate_gene is linked to the QTL, but more than 10 cM from it.
See reference for statistics from simultaneous analyses with and without interaction
Soybean Cyst Nematode ( SCN ) is caused by the nematode Heterodera glycines.






Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA
 
USDA Logo
Iowa State University Logo