SCN 15-1

Parent 1:	PI88287
Parent 2:	PI89008
Trait name:	Reaction to Heterodera glycines

Controlled vocabulary terms associated with the QTL

Source	Accession Number
Plant Trait Ontology	TO:0000384
Gene Ontology	GO:0009624

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References for the QTL

Vaghchhipawala et al. 2001

Modulations in gene expression and mapping of genes associated with cyst nematode infection of soybean
Mol. Plant Microbe Interac. 2001, 14(1):42-54

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Genes associated with the QTL

Rhg1

Maps containing SCN 15-1

Map	LG	Start	End
GmComposite2003_G	G	5.77	35.51	See this QTL region in Sequence Browser

Population types used in identification of the QTL

Parent trait values associated with the QTL

Parent	Trait
PI88287	Resistant
PI89008	Susciptible

Loci associated with the QTL

A112_1

B053_1

Gene associated with the QTL

Rhg1

Methods used to identify the QTL

Bulk segregant analysis

Comments about the QTL

The trait is resistance to Soybean Cyst Nematode ( SCN ) disease which is caused by the nematode Heterodera glycines. A Candidate_gene maps within 10 cM of the QTL. A Putative_candidate_gene is linked to the QTL, but more than 10 cM from it.

Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA

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