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SCN 10-1
Parent 1:Peking
Parent 2:Essex
Num loci tested:216
Trait name:Reaction to Heterodera glycines

Controlled vocabulary terms associated with the QTL
SourceAccession Number
Plant Trait OntologyTO:0000384
Gene OntologyGO:0009624

     
Other related QTL's
SCN 10-2
SCN 10-3
SCN 10-4
SCN 10-5

References for the QTL
Qiu et al. 1999RFLP markers associated with soybean cyst nematode resistance and seed composition in a 'Peking' x 'Essex' population. 
Theor. Appl. Genet. 1999, 98(3-4):356-364

     
Maps containing SCN 10-1
MapLGStartEnd
GmComposite2003_B2 B297.5499.54See this QTL region in Sequence Browser

Loci positively associated with the QTL
A593_1Parent_119
A593_1Parent_244
A593_1Heterozygous30
A593_1Phenotypic_R20.210000
A593_1P_GT_F0.000100
A593_1Genetic_effectsAdditive
A593_1D_to_A_ratio-0.120000
A593_1Favorable_allele_sourcePeking

Population types used in identification of the QTL
F2:3

Parent trait values associated with the QTL
ParentTrait
PekingResistant; mean IP value 0.60
EssexSusceptible; mean IP value 308.25

Other QTLs studied
Oil
Protein

Loci associated with the QTL
A593_1

Methods used to identify the QTL
Two-way regression

Comments about the QTL
Locus A593 in original paper
Parent 1 is Peking, parent 2 Essex
Study done by analysis of variance at locus; for purposes of display this was converted to an interval around that locus.
The trait is resistance to Soybean Cyst Nematode ( SCN ) disease which is caused by the nematode Heterodera glycines.






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