SoyBase SoyBase transitions to NEW site on 10/1/2024
Integrating Genetics and Genomics to Advance Soybean Research

Pod weight 2-1
Parent 1:Fiskeby III
Parent 2:Mandarin
Heritability:0.95
Num loci tested:501
Intervals associated:BARC-061273-17145
Interval length:16.63
Interval LOD score:7.66
Interval P value:0
Trait name:Pod weight

Controlled vocabulary terms associated with the QTL
SourceAccession Number
Plant Trait OntologyTO:0002746
Plant OntologyPO:0009001

     
Other names for the QTL
PodwtQTL4.2

References for the QTL
Hacisalihoglu et al. 2018aQuantitative trait loci associated with soybean seed weight and composition under different phosphorus levels 
JIPB (2018) 3:232-241

     
Maps containing Pod weight 2-1
MapLGStartEnd
GmComposite2003_C1 C154.6056.60See this QTL region in Sequence Browser

Loci positively associated with the QTL
BARC-061273-17145 Parent_1Stress tolerant
BARC-061273-17145 Parent_2Stress sensitive
BARC-061273-17145 Phenotypic_R221
BARC-061273-17145 P_value0

Population types used in identification of the QTL
RIL F5:7

Parent trait values associated with the QTL
ParentTrait
Fiskeby IIIStress tolerant
MandarinStress sensitive

Other QTLs studied
Seed volume
Seed protein

Loci associated with the QTL
BARC-061273-17145

Methods used to identify the QTL
ANOVA
CIM

Comments about the QTL
QTL associated markers were approximately placed on the SoyBase Composite2003 genetic map by identifying the nearest genetically mapped markers on each side of the given marker on the Wm82.a2 genome, and calculating the markerŐs position on the genetic map based off of the relative distance to each of the flanking markers.






Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA
 
USDA Logo
Iowa State University Logo