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Integrating Genetics and Genomics to Advance Soybean Research

Plant height 43-2
Parent 1:CSSL3228
Parent 2:NN1138Š2
Intervals associated:ss715615629-ss715615687
Interval length:1.6
Interval LOD score:14.35
Trait name:Plant Height

Controlled vocabulary terms associated with the QTL
SourceAccession Number
Plant Trait OntologyTO:0000207
Plant OntologyPO:0006341

     
References for the QTL
Zhang et al. 2018aCombining QTL-seq and linkage mapping to fine map a wild soybean allele characteristic of greater plant height 
BMC Genomics 2018, 19:226

     
Maps containing Plant height 43-2
MapLGStartEnd
GmComposite2003_F F91.9093.60See this QTL region in Sequence Browser

Loci positively associated with the QTL
ss715615629Phenotypic_R214.94
ss715615629Additive_effect2.03

Population types used in identification of the QTL
F2

Other QTLs studied
Plant height 43-1

Loci associated with the QTL
ss715615629

Methods used to identify the QTL
JoinMap 4.0
IciMapping 2.0

Comments about the QTL
QTL associated markers were approximately placed on the SoyBase Composite2003 genetic map by BLASTing the markerÕs sequence against the Wm82.a2 genome, identifying the nearest genetically mapped markers on each side of the BLAST hit, and interpolating the markerÕs position on the genetic map to a similar relative position.






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