Asian Soybean Rust 1-1

Parent 1:	PI 561356
Parent 2:	LD02-4485
Num loci tested:	6
Interval length:	2
Interval LOD score:	26.2
Trait name:	Reaction to Phakopsora pachyrhizi infection

Controlled vocabulary terms associated with the QTL

Source	Accession Number
Plant Trait Ontology	TO:0000439

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References for the QTL

Kim et al. 2012

Molecular mapping of soybean rust resistance in soybean accession PI 561356 and SNP haplotype analysis o the Rpp1 region in diverse germplasm
Theor. Appl. Genet. 2012, 125(6):1339-1352

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Maps containing Asian Soybean Rust 1-1

This QTL could not be placed on the Composite genetic map. See comments below for more information.

Loci positively associated with the QTL

The locus associated with this QTL could not be placed on the Composite genetic map. See comments below for more information.

Locus	Parameter	Value
9999	Phenotypic_R2	70.1

Population types used in identification of the QTL

F2:3

Parent trait values associated with the QTL

Parent	Trait
PI 561356	Rust resistant
LD02-4485	Rust susceptible

Methods used to identify the QTL

JoinMap 3.0

MapQTL 4.0

BSA

Comments about the QTL

Publication did not provide a linkage group for locating the marker given (SSR66). Therefore the QTL is not shown on the 2003 Composite map. See publication for additional details

Publication measured soybean rust severity which was defined as a scale of 1 to 5, where 1=No visible symptoms, 5=Prolific lesions. See publication for additional details

Parent_1 was PI 561356, Parent_2 was LD02-4485

The causative agent for Asian soybean rust is Phakopsora pachyrhizi.

Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA

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