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Integrating Genetics and Genomics to Advance Soybean Research

Locus Type:  SSR


Maps Containing Sct_199
Map NamePosition
GmComposite2003_G 94.4
GmConsensus40_G 85.655


Genomic Sequence Information for Sct_199
ChromosomeStart PosEnd PosMotifDerived FromPolymorphic*Assembly Version
Gm18 5809345158093530(AT)14(AG)17aa(AG)8Wm82yesGlyma 1.0
Gm18 5382376453823972(AT)14(AG)17aa(AG)8Wm82yesGlyma 2.0

*Polymorphic in the following germplasms:
Williams 82,  Noir 1,  Minsoy,  Archer,  Evans,  Peking,  Essex, and   PI 468916


QTLs Associated with Sct_199
mqSeed Oil-017
Plant height 37-7
Pod maturity 34-7
SCN 37-2
Seed oil 24-27
Seed stearic 6-4


Amplification Info for Sct_199
More than one entry indicates that this SSR was independently identified by different labs sometimes using separate methodology resulting in unique primer pairs.
NameSct_199
Primer1GCGACAATGGCTATTAGTAACAATCA
Primer2GCGATTTTCTATTTTCCTCACAGTG
Motif(AT)14(AG)17aa(AG)8
    
NameBARCSOYSSR_18_1703
Primer1GCGACAATGGCTATTAGTAACAATCA
Primer2GCGATTTTCTATTTTCCTCACAGTG
Motif(AT)14(AG)17aa(AG)8
    

References for Sct_199
Cregan et al. 1999A An integrated genetic linkage map of the soybean genome Crop Sci. 1999, 39(5):1464-1490






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