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Integrating Genetics and Genomics to Advance Soybean Research

Locus Type:  SSR


Maps Containing Sct_010
Map NamePosition
GmComposite2003_L 59.52
GmConsensus40_L 54.141


Genomic Sequence Information for Sct_010
ChromosomeStart PosEnd PosMotifDerived FromPolymorphic*Assembly Version
Gm19 4118766741187686(GA)10Wm82yesGlyma 1.0
Gm19 4138030441380452(GA)10Wm82yesGlyma 2.0
Gm19 4138030441380452Glyma 2.0

*Polymorphic in the following germplasms:
Williams 82,  Noir 1,  Minsoy,  Archer,  Evans,  Peking,  Essex, and   PI 468916


QTLs Associated with Sct_010
First flower 15-2
Leaflet length 6-4
Leaflet length 7-11
Leaflet shape 6-15
Leaflet shape 7-10
Pod dehiscence 3-5
Pod maturity 15-4
Seed coat cracking 3-7
Seed linoleic 7-5
Seed oleic 7-5
Seed sucrose 2-10
Seed weight 35-7
Total growth duration 1-3


Amplification Info for Sct_010
More than one entry indicates that this SSR was independently identified by different labs sometimes using separate methodology resulting in unique primer pairs.
NameSct_010
Primer1TCCCAAAAGCATTGAG
Primer2TATGCACGGAAGAGGA
Motif(GA)10
    
NameBARCSOYSSR_19_1112
Primer1TCCCAAAAGCATTGAG
Primer2TATGCACGGAAGAGGA
Motif(GA)10
    

References for Sct_010
Cregan et al. 1999A An integrated genetic linkage map of the soybean genome Crop Sci. 1999, 39(5):1464-1490






Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA
 
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