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Integrating Genetics and Genomics to Advance Soybean Research

Locus Type:  SSR


Maps Containing Sct_001
Map NamePosition
GmComposite2003_J 44.68
GmConsensus40_J 47.554


Genomic Sequence Information for Sct_001
ChromosomeStart PosEnd PosMotifDerived FromPolymorphic*Assembly Version
Gm16 2698919826989225(CT)14Wm82yesGlyma 1.0

*Polymorphic in the following germplasms:
Williams 82,  Noir 1,  Minsoy,  Archer,  Evans,  Peking,  Essex, and   PI 468916


QTLs Associated with Sct_001
Leaflet length 8-3
Leaflet length 9-4
Leaflet width 8-5
Leaflet width 9-3
Seed height to width ratio 1-2
Seed set 1-10
Seed weight 30-6


Amplification Info for Sct_001
More than one entry indicates that this SSR was independently identified by different labs sometimes using separate methodology resulting in unique primer pairs.
NameSct_001
Primer1TTAAGTTTCCCTCTCTCTCT
Primer2CTTGTTCCTTCGCTCAC
Motif(CT)14
    
NameBARCSOYSSR_16_0812
Primer1TTAAGTTTCCCTCTCTCTCT
Primer2CTTGTTCCTTCGCTCAC
Motif(CT)14
    

References for Sct_001
Cregan et al. 1999A An integrated genetic linkage map of the soybean genome Crop Sci. 1999, 39(5):1464-1490






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