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Integrating Genetics and Genomics to Advance Soybean Research

Locus Type:  SSR


Maps Containing Satt688
Map NamePosition
GmComposite2003_G 12.54
GmConsensus40_G 14.678


Genomic Sequence Information for Satt688
ChromosomeStart PosEnd PosMotifDerived FromPolymorphic*Assembly Version
Gm18 32643433264375(TTA)11Wm82yesGlyma 1.0
Gm18 32758573276029(TTA)11Wm82yesGlyma 2.0

*Polymorphic in the following germplasms:
Williams 82,  Noir 1,  Minsoy,  Archer,  Evans,  Peking,  Essex, and   PI 468916


QTLs Associated with Satt688
Leaflet chlorophyll 1-2
Phytoph 8-3
SCN 29-1
SCN 29-4
SCN 29-8
SCN 33-1
SCN 45-1
Seed length 4-7
Seed length to width ratio 1-14
Seed thickness 1-7
Seed width 4-8


Amplification Info for Satt688
More than one entry indicates that this SSR was independently identified by different labs sometimes using separate methodology resulting in unique primer pairs.
NameSatt688
Primer1ATGCCTCCAAAGAGAAAT
Primer2CTGCCCATTGACCCATCT
Motif(TTA)11
    
NameBARCSOYSSR_18_0181
Primer1ATGCCTCCAAAGAGAAAT
Primer2CTGCCCATTGACCCATCT
Motif(TTA)11
    

References for Satt688
Song et al. 2004 A new integrated genetic linkage map of the soybean Theor Appl Genet 2004 109:122-128






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