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Integrating Genetics and Genomics to Advance Soybean Research

Locus Type:  SSR


Maps Containing Satt663
Map NamePosition
GmComposite2003_F 56.16
GmConsensus40_F 39.617


Genomic Sequence Information for Satt663
ChromosomeStart PosEnd PosMotifDerived FromPolymorphic*Assembly Version
Gm13 2445134724451452(TTA)27ctattactattac(TAT)4Wm82yesGlyma 1.0
Gm13 2593663125936876(TTA)27ctattactattac(TAT)4Wm82yesGlyma 2.0

*Polymorphic in the following germplasms:
Williams 82,  Noir 1,  Minsoy,  Archer,  Evans,  Peking,  Essex, and   PI 468916


QTLs Associated with Satt663
Plant P 3-1
Root area 2-1
Root length 1-2
Seed weight 50-14
Seed weight 50-7


Amplification Info for Satt663
More than one entry indicates that this SSR was independently identified by different labs sometimes using separate methodology resulting in unique primer pairs.
NameSatt663
Primer1GCGTCATGCAATGTTGTATAAT
Primer2GCGACTGCAGATAACTTGACTGGTAGT
Motif(TTA)27ctattactattac(TAT)4
    
NameBARCSOYSSR_13_0877
Primer1GCGTCATGCAATGTTGTATAAT
Primer2GCGACTGCAGATAACTTGACTGGTAGT
Motif(TTA)27ctattactattac(TAT)4
    


Information Providers
Song, Qijian and Cregan, Perry

References for Satt663
Song et al. 2004 A new integrated genetic linkage map of the soybean Theor Appl Genet 2004 109:122-128






Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA
 
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