SoyBase SoyBase transitions to NEW site on 10/1/2024
Integrating Genetics and Genomics to Advance Soybean Research

Locus Type:  SSR


Maps Containing Satt646
Map NamePosition
GmComposite2003_C1 70.51
GmConsensus40_C1 46.007


Genomic Sequence Information for Satt646
ChromosomeStart PosEnd PosMotifDerived FromPolymorphic*Assembly Version
Gm04 88309248830956(TTA)11Wm82yesGlyma 1.0
Gm04 89077808907972(TTA)11Wm82yesGlyma 2.0

*Polymorphic in the following germplasms:
Williams 82,  Noir 1,  Minsoy,  Archer,  Evans,  Peking,  Essex, and   PI 468916


QTLs Associated with Satt646
Canopy wilt 2-2
Seed glycinin 2-3
Seed glycinin plus beta-conglycinin 1-3
Seed tocopherol, gamma 3-1
Seed tocopherol, total 3-1
Seed weight 50-9


Amplification Info for Satt646
More than one entry indicates that this SSR was independently identified by different labs sometimes using separate methodology resulting in unique primer pairs.
NameSatt646
Primer1GCGGGGTATGAATTAATTAATGTAGAAT
Primer2GCGCCTTCAAAAACTAATGACATATCAT
Motif(TTA)11
    
NameBARCSOYSSR_04_0460
Primer1GCGGGGTATGAATTAATTAATGTAGAAT
Primer2GCGCCTTCAAAAACTAATGACATATCAT
Motif(TTA)11
    


Information Providers
Song, Qijian and Cregan, Perry

References for Satt646
Song et al. 2004 A new integrated genetic linkage map of the soybean Theor Appl Genet 2004 109:122-128






Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA
 
USDA Logo
Iowa State University Logo