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Integrating Genetics and Genomics to Advance Soybean Research

Locus Type:  SSR


Maps Containing Satt640
Map NamePosition
GmComposite2003_C2 30.46
GmConsensus40_C2 29.628


Genomic Sequence Information for Satt640
ChromosomeStart PosEnd PosMotifDerived FromPolymorphic*Assembly Version
Gm06 46770484677119(TAT)24Wm82yesGlyma 1.0
Gm06 46828534683083(TAT)24Wm82yesGlyma 2.0

*Polymorphic in the following germplasms:
Williams 82,  Noir 1,  Minsoy,  Archer,  Evans,  Peking,  Essex, and   PI 468916


QTLs Associated with Satt640
Flower form 1-1
Plant height 37-2
Seed glycinin plus beta-conglycinin 1-5
Seed length 4-1
Seed length to width ratio 1-5
Seed thickness 1-4
Seed weight per plant 6-1
Seed width 4-4
Seed width to thickness ratio 1-3
Seed yield 23-12


Amplification Info for Satt640
More than one entry indicates that this SSR was independently identified by different labs sometimes using separate methodology resulting in unique primer pairs.
NameSatt640
Primer1AGATACCTACGGAGTGTTTTTT
Primer2GGTTCCCCGGTGGCTACACAAC
Motif(TAT)24
    
NameBARCSOYSSR_06_0268
Primer1AGATACCTACGGAGTGTTTTTT
Primer2GGTTCCCCGGTGGCTACACAAC
Motif(TAT)24
    


Information Providers
Song, Qijian and Cregan, Perry

References for Satt640
Song et al. 2004 A new integrated genetic linkage map of the soybean Theor Appl Genet 2004 109:122-128






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