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Integrating Genetics and Genomics to Advance Soybean Research

Locus Type:  SSR


Maps Containing Satt590
Map NamePosition
GmComposite2003_M 7.84
GmConsensus40_M 7.753


Genomic Sequence Information for Satt590
ChromosomeStart PosEnd PosMotifDerived FromPolymorphic*Assembly Version
Gm07 12992861299363(AAT)26Wm82yesGlyma 1.0
Gm07 13013151301618(AAT)26Wm82yesGlyma 2.0

*Polymorphic in the following germplasms:
Williams 82,  Noir 1,  Minsoy,  Archer,  Evans,  Peking,  Essex, and   PI 468916


QTLs Associated with Satt590
Chlorosis, leaflet UV-B induced 1-1
Leaflet shape, UV-B induced 10-4
mqPlant height-011
Petiole color, UV-B induced 1-2
Plant damage, UV-B induced 1-4
Seed length 5-3
Seed Met 1-3
Seed Met 2-3
Seed Met plus Cys 1-3
Seed oleic 7-1
Seed stearic 3-3
Seed weight 10-11
Seed yield 19-5


Amplification Info for Satt590
More than one entry indicates that this SSR was independently identified by different labs sometimes using separate methodology resulting in unique primer pairs.
NameSatt590
Primer1GCGCGCATTTTTTAAGTTAATGTTCT
Primer2GCGCGAGTTAGCGAATTATTTGTC
Motif(AAT)26
    
NameBARCSOYSSR_07_0080
Primer1GCGCGCATTTTTTAAGTTAATGTTCT
Primer2GCGCGAGTTAGCGAATTATTTGTC
Motif(AAT)26
    


Information Providers
Song, Qijian and Cregan, Perry

References for Satt590
Cregan et al. 1999A An integrated genetic linkage map of the soybean genome Crop Sci. 1999, 39(5):1464-1490






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