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Integrating Genetics and Genomics to Advance Soybean Research

Locus Type:  SSR


Maps Containing Satt578
Map NamePosition
GmComposite2003_C1 65.08
GmConsensus40_C1 40.86


Genomic Sequence Information for Satt578
ChromosomeStart PosEnd PosMotifDerived FromPolymorphic*Assembly Version
Gm04 78194427819474(TAT)11Wm82yesGlyma 1.0
Gm04 78916697891823(TAT)11Wm82yesGlyma 2.0

*Polymorphic in the following germplasms:
Williams 82,  Noir 1,  Minsoy,  Archer,  Evans,  Peking,  Essex, and   PI 468916


QTLs Associated with Satt578
Phytoph 14-7
Pod maturity 8-5
Seed agglutinin 3-1
Seed height 1-12
Seed length 1-13
Seed linolenic 6-2
Seed oil 29-1
Seed protein 19-1
Seed protein 7-2
Seed set 1-5
Seed volume 1-9
Stem length, main 2-1
Stem strength, main 1-4


Amplification Info for Satt578
More than one entry indicates that this SSR was independently identified by different labs sometimes using separate methodology resulting in unique primer pairs.
NameSatt578
Primer1CCCACGTCATATCCACTGCTCCTTA
Primer2ACAGCATCGATACCATGATCTAT
Motif(TAT)11
    
NameBARCSOYSSR_04_0416
Primer1CCCACGTCATATCCACTGCTCCTTA
Primer2ACAGCATCGATACCATGATCTAT
Motif(TAT)11
    


Information Providers
Song, Qijian and Cregan, Perry

References for Satt578
Cregan et al. 1999A An integrated genetic linkage map of the soybean genome Crop Sci. 1999, 39(5):1464-1490






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