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Integrating Genetics and Genomics to Advance Soybean Research

Locus Type:  SSR


Maps Containing Satt561
Map NamePosition
GmComposite2003_L 71.44
GmConsensus40_L 62.571


Genomic Sequence Information for Satt561
ChromosomeStart PosEnd PosMotifDerived FromPolymorphic*Assembly Version
Gm19 4302254343022572(TTA)10Wm82yesGlyma 1.0

*Polymorphic in the following germplasms:
Williams 82,  Noir 1,  Minsoy,  Archer,  Evans,  Peking,  Essex, and   PI 468916


QTLs Associated with Satt561
cqSeed phytate-002
First flower 25-4
Pod maturity 24-4
Pod number 9-3
Reproductive stage length 5-6
Seed number 6-1
Seed phytate 2-2
Seed weight 34-7
Seed weight 36-7
Seed weight 43-4
Seed weight per plant 5-2
Seed yield 8-1
Stem length, main 3-2
Stem weight, dry 2-2
Seed phytate 1-1


Amplification Info for Satt561
More than one entry indicates that this SSR was independently identified by different labs sometimes using separate methodology resulting in unique primer pairs.
NameSatt561
Primer1GCGGACGAATTTTCCAGA
Primer2GCGGGGCAACAATATTTGAATCTA
Motif(TTA)10
    
NameBARCSOYSSR_19_1230
Primer1GCGGACGAATTTTCCAGA
Primer2GCGGGGCAACAATATTTGAATCTA
Motif(TTA)10
    

References for Satt561
Cregan et al. 1999A An integrated genetic linkage map of the soybean genome Crop Sci. 1999, 39(5):1464-1490






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