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Integrating Genetics and Genomics to Advance Soybean Research

Locus Type:  SSR


Maps Containing Satt554
Map NamePosition
GmComposite2003_F 111.88
GmConsensus40_F 87.785


Genomic Sequence Information for Satt554
ChromosomeStart PosEnd PosMotifDerived FromPolymorphic*Assembly Version
Gm13 3807529138075387(TAT)11t(TTA)21Wm82yesGlyma 1.0
Gm13 3925265839252909(TAT)11t(TTA)21Wm82yesGlyma 2.0

*Polymorphic in the following germplasms:
Williams 82,  Noir 1,  Minsoy,  Archer,  Evans,  Peking,  Essex, and   PI 468916


QTLs Associated with Satt554
Asian Soybean Rust 2-3
Nodule number 3-7
Nodule weight per plant, dry 1-12
Plant height 39-1
Stem length, main 2-2


Amplification Info for Satt554
More than one entry indicates that this SSR was independently identified by different labs sometimes using separate methodology resulting in unique primer pairs.
NameSatt554
Primer1GCGATATGCTTTGTAAGAAAATTA
Primer2GCGCAAGCCCAAATATTACAAATT
Motif(TAT)11t(TTA)21
    
NameBARCSOYSSR_13_1617
Primer1GCGATATGCTTTGTAAGAAAATTA
Primer2GCGCAAGCCCAAATATTACAAATT
Motif(TAT)11t(TTA)21
    


Information Providers
Song, Qijian and Cregan, Perry

References for Satt554
Cregan et al. 1999A An integrated genetic linkage map of the soybean genome Crop Sci. 1999, 39(5):1464-1490






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