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Integrating Genetics and Genomics to Advance Soybean Research

Locus Type:  SSR


Maps Containing Satt490
Map NamePosition
GmComposite2003_F 97.97
GmConsensus40_F 74.88


Genomic Sequence Information for Satt490
ChromosomeStart PosEnd PosMotifDerived FromPolymorphic*Assembly Version
Gm13 3555776435557835(AG)5acgtaata(AAT)18Wm82yesGlyma 1.0
Gm13 3669918936699478(AG)5acgtaata(AAT)18Wm82yesGlyma 2.0

*Polymorphic in the following germplasms:
Williams 82,  Noir 1,  Minsoy,  Archer,  Evans,  Peking,  Essex, and   PI 468916


QTLs Associated with Satt490
Asian Soybean Rust 2-3
Plant height 17-1
Seed daidzein 2-6
Seed genistein 7-5
Seed oil 37-8


Amplification Info for Satt490
More than one entry indicates that this SSR was independently identified by different labs sometimes using separate methodology resulting in unique primer pairs.
NameSatt490
Primer1GCGGCACGAGTCAACTTTCTGTTTCCT
Primer2GCGGAAGAAGATTTTCGTTTTTAT
Motif(AG)5acgtaata(AAT)18
    
NameBARCSOYSSR_13_1471
Primer1GCGGCACGAGTCAACTTTCTGTTTCCT
Primer2GCGGAAGAAGATTTTCGTTTTTAT
Motif(AG)5acgtaata(AAT)18
    


Information Providers
Song, Qijian and Cregan, Perry

References for Satt490
Cregan et al. 1999A An integrated genetic linkage map of the soybean genome Crop Sci. 1999, 39(5):1464-1490






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