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Integrating Genetics and Genomics to Advance Soybean Research

Locus Type:  SSR


Maps Containing Satt477
Map NamePosition
GmComposite2003_O 82.08
GmConsensus40_O 77.312


Genomic Sequence Information for Satt477
ChromosomeStart PosEnd PosMotifDerived FromPolymorphic*Assembly Version
Gm10 3974947239749504(TAT)11Wm82yesGlyma 1.0
Gm10 4030679340306952(TAT)11Wm82yesGlyma 2.0

*Polymorphic in the following germplasms:
Williams 82,  Noir 1,  Minsoy,  Archer,  Evans,  Peking,  Essex, and   PI 468916


QTLs Associated with Satt477
Flood tolerance 4-7
Pod maturity 19-7
Root area, medium 1-2
Root volume 2-2
Root volume, medium 1-2
Root weight, dry 4-2
Sclero 2-23
Sclero 3-18
Sclero 4-10
Sclero 5-15
Sclero 6-12
Seed weight 12-7
Seed yield 23-8


Amplification Info for Satt477
More than one entry indicates that this SSR was independently identified by different labs sometimes using separate methodology resulting in unique primer pairs.
NameSatt477
Primer1GTTGGGAAAAGGTTACTACCATATC
Primer2GGTCCGTATGCAATTCTTGACTAATA
Motif(TAT)11
    
NameBARCSOYSSR_10_1148
Primer1GTTGGGAAAAGGTTACTACCATATC
Primer2GGTCCGTATGCAATTCTTGACTAATA
Motif(TAT)11
    


Information Providers
Song, Qijian and Cregan, Perry

References for Satt477
Cregan et al. 1999A An integrated genetic linkage map of the soybean genome Crop Sci. 1999, 39(5):1464-1490






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