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Integrating Genetics and Genomics to Advance Soybean Research

Locus Type:  SSR


Maps Containing Satt468
Map NamePosition
GmComposite2003_D1a 69.91
GmConsensus40_D1a 52.412


Genomic Sequence Information for Satt468
ChromosomeStart PosEnd PosMotifDerived FromPolymorphic*Assembly Version
Gm01 4885378448853853(ATTT)3tgaaattcttcatatt(TTA)14Wm82yesGlyma 1.0
Gm01 4973409849734310(ATTT)3tgaaattcttcatatt(TTA)14Wm82yesGlyma 2.0

*Polymorphic in the following germplasms:
Williams 82,  Noir 1,  Minsoy,  Archer,  Evans,  Peking,  Essex, and   PI 468916


QTLs Associated with Satt468
Flower form 1-2
Root length, primary 5-1
Seed conglycinin, beta 2-1
Seed glycinin 2-2
Seed glycinin plus beta-conglycinin 1-1
Seed oil 13-2
Seed oil 24-10
Seed protein 36-10
Seed weight 34-11


Amplification Info for Satt468
More than one entry indicates that this SSR was independently identified by different labs sometimes using separate methodology resulting in unique primer pairs.
NameSatt468
Primer1GCGTCTCTTATTTTGACCTTTTTAACTT
Primer2GCGTTTTGTATTTGGTCTATCTGCTTAG
Motif(ATTT)3tgaaattcttcatatt(TTA)14
    
NameBARCSOYSSR_01_1355
Primer1GCGTCTCTTATTTTGACCTTTTTAACTT
Primer2GCGTTTTGTATTTGGTCTATCTGCTTAG
Motif(ATTT)3tgaaattcttcatatt(TTA)14
    


Information Providers
Song, Qijian and Cregan, Perry

References for Satt468
Cregan et al. 1999A An integrated genetic linkage map of the soybean genome Crop Sci. 1999, 39(5):1464-1490






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