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Integrating Genetics and Genomics to Advance Soybean Research

Locus Type:  SSR


Maps Containing Satt431
Map NamePosition
GmComposite2003_J 78.57
GmConsensus40_J 82.025


Genomic Sequence Information for Satt431
ChromosomeStart PosEnd PosMotifDerived FromPolymorphic*Assembly Version
Gm16 3571847635718538(AAT)21Wm82yesGlyma 1.0
Gm16 3622117436221397(AAT)21Wm82yesGlyma 2.0

*Polymorphic in the following germplasms:
Williams 82,  Noir 1,  Minsoy,  Archer,  Evans,  Peking,  Essex, and   PI 468916


QTLs Associated with Satt431
BSR 3-1
BSR 4-1
cqSCN-003
First flower 13-8
Leaflet length 8-4
Leaflet length 9-5
Photoperiod insensitivity 5-4
Pod wall width 1-9
SCN 28-4
Seed oil 39-12
Seed protein 41-6
Seed yield 21-5


Amplification Info for Satt431
More than one entry indicates that this SSR was independently identified by different labs sometimes using separate methodology resulting in unique primer pairs.
NameSatt431
Primer1GCGTGGCACCCTTGATAAATAA
Primer2GCGCACGAAAGTTTTTCTGTAACA
Motif(AAT)21
    
NameBARCSOYSSR_16_1234
Primer1GCGTGGCACCCTTGATAAATAA
Primer2GCGCACGAAAGTTTTTCTGTAACA
Motif(AAT)21
    

References for Satt431
Cregan et al. 1999A An integrated genetic linkage map of the soybean genome Crop Sci. 1999, 39(5):1464-1490






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