SoyBase SoyBase transitions to NEW site on 10/1/2024
Integrating Genetics and Genomics to Advance Soybean Research

Locus Type:  SSR


Maps Containing Satt398
Map NamePosition
GmComposite2003_L 30.58
GmConsensus40_L 28.291


Genomic Sequence Information for Satt398
ChromosomeStart PosEnd PosMotifDerived FromPolymorphic*Assembly Version
Gm19 2728696027286971(ATTA)3Wm82yesGlyma 1.0

*Polymorphic in the following germplasms:
Williams 82,  Noir 1,  Minsoy,  Archer,  Evans,  Peking,  Essex, and   PI 468916


QTLs Associated with Satt398
cqSeed oil-003
Leaflet length 8-11
Leaflet length 9-12
Leaflet width 8-12
Leaflet width 9-6
Seed oil 24-9
Seed oligosaccharide 1-5
Seed sucrose 2-6


Amplification Info for Satt398
More than one entry indicates that this SSR was independently identified by different labs sometimes using separate methodology resulting in unique primer pairs.
NameSatt398
Primer1GTAAGGGCGGGTATCAACAGTGCT
Primer2GGTAACCGCGGACTCAGTTAAAC
Motif(ATTA)3
    
NameBARCSOYSSR_19_0605
Primer1GTAAGGGCGGGTATCAACAGTGCT
Primer2GGTAACCGCGGACTCAGTTAAAC
Motif(ATTA)3
    

References for Satt398
Cregan et al. 1999A An integrated genetic linkage map of the soybean genome Crop Sci. 1999, 39(5):1464-1490






Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA
 
USDA Logo
Iowa State University Logo