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Integrating Genetics and Genomics to Advance Soybean Research

Locus Type:  SSR


Maps Containing Satt335
Map NamePosition
GmComposite2003_F 77.69
GmConsensus40_F 61.053


Genomic Sequence Information for Satt335
ChromosomeStart PosEnd PosMotifDerived FromPolymorphic*Assembly Version
Gm13 3150948631509497(TCT)4Wm82yesGlyma 1.0
Gm13 3272148132721640Glyma 2.0

*Polymorphic in the following germplasms:
Williams 82,  Noir 1,  Minsoy,  Archer,  Evans,  Peking,  Essex, and   PI 468916


QTLs Associated with Satt335
Lodging 6-2
Node number 1-8
Plant height 20-6
Plant height 40-2
Pod maturity 20-1
Sclero 5-7
Seed fill 3-1
Seed length 1-9
Seed oil 37-7
Seed oil 37-8
Seed protein 24-2
Seed protein 33-2
Seed tocopherol, delta 3-3
Seed tocopherol, gamma 3-7
Seed weight 15-3
Seed weight 41-2
Seed weight 49-12
Seed weight 49-13


Amplification Info for Satt335
More than one entry indicates that this SSR was independently identified by different labs sometimes using separate methodology resulting in unique primer pairs.
NameSatt335
Primer1CAAGCTCAAGCCTCACACAT
Primer2TGACCAGAGTCCAAAGTTCATC
Motif(TCT)4
    
NameBARCSOYSSR_13_1271
Primer1CAAGCTCAAGCCTCACACAT
Primer2TGACCAGAGTCCAAAGTTCATC
Motif(TCT)4
    


Information Providers
Song, Qijian and Cregan, Perry

References for Satt335
Cregan et al. 1999A An integrated genetic linkage map of the soybean genome Crop Sci. 1999, 39(5):1464-1490






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