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Integrating Genetics and Genomics to Advance Soybean Research

Locus Type:  SSR


Maps Containing Satt288
Map NamePosition
GmComposite2003_G 76.76
GmConsensus40_G 71.577


Genomic Sequence Information for Satt288
ChromosomeStart PosEnd PosMotifDerived FromPolymorphic*Assembly Version
Gm18 5540703455407084(TAA)17Wm82yesGlyma 1.0
Gm18 5112742551127646Glyma 2.0

*Polymorphic in the following germplasms:
Williams 82,  Noir 1,  Minsoy,  Archer,  Evans,  Peking,  Essex, and   PI 468916


QTLs Associated with Satt288
Plant height 26-12
Pod borer 1-3
Pod wall weight 1-3
Seed daidzein 13-7
Seed genistein 13-12
Seed isoflavone 2-3
Seed linoleic 6-10
Seed oil 42-35
Seed oleic 3-3
Seed oleic 6-8
Seed palmitic 4-4
Seed stearic 3-2
Seed weight 37-4
Seed yield 22-17
Seed yield 22-18


Amplification Info for Satt288
More than one entry indicates that this SSR was independently identified by different labs sometimes using separate methodology resulting in unique primer pairs.
NameSatt288
Primer1GCGGGGTGATTTAGTGTTTGACACCT
Primer2GCGCTTATAATTAAGAGCAAAAGAAG
Motif(TAA)17
    
NameBARCSOYSSR_18_1536
Primer1GCGGGGTGATTTAGTGTTTGACACCT
Primer2GCGCTTATAATTAAGAGCAAAAGAAG
Motif(TAA)17
    

References for Satt288
Cregan et al. 1999A An integrated genetic linkage map of the soybean genome Crop Sci. 1999, 39(5):1464-1490






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