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Integrating Genetics and Genomics to Advance Soybean Research

Locus Type:  SSR


Maps Containing Satt280
Map NamePosition
GmComposite2003_J 38.7
GmConsensus40_J 41.847


Genomic Sequence Information for Satt280
ChromosomeStart PosEnd PosMotifDerived FromPolymorphic*Assembly Version
Gm16 1876959718769638(TTA)14Wm82yesGlyma 1.0
Gm16 2154360821543831(TTA)14Wm82yesGlyma 2.0

*Polymorphic in the following germplasms:
Williams 82,  Noir 1,  Minsoy,  Archer,  Evans,  Peking,  Essex, and   PI 468916


QTLs Associated with Satt280
SDS 15-7
Seed daidzein 6-3
Seed isoflavone 5-3
Seed tocopherol, gamma 1-8
Seed tocopherol, gamma 2-7


Amplification Info for Satt280
More than one entry indicates that this SSR was independently identified by different labs sometimes using separate methodology resulting in unique primer pairs.
NameSatt280
Primer1GCGGAATCTGCTTATTCATTGTGTG
Primer2GCGCCATGCTGTAACACGTCAAT
Motif(TTA)14
    
NameBARCSOYSSR_16_0632
Primer1GCGGAATCTGCTTATTCATTGTGTG
Primer2GCGCCATGCTGTAACACGTCAAT
Motif(TTA)14
    

References for Satt280
Cregan et al. 1999A An integrated genetic linkage map of the soybean genome Crop Sci. 1999, 39(5):1464-1490






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