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Integrating Genetics and Genomics to Advance Soybean Research

Locus Type:  SSR


Maps Containing Satt199
Map NamePosition
GmComposite2003_G 62.16
GmConsensus40_G 60.599


Genomic Sequence Information for Satt199
ChromosomeStart PosEnd PosMotifDerived FromPolymorphic*Assembly Version
Gm18 5246572752465788(TA)10(ATA)15*Wm82yesGlyma 1.0
Gm18 4818513848185329(TA)10(ATA)15*Wm82yesGlyma 2.0

*Polymorphic in the following germplasms:
Williams 82,  Noir 1,  Minsoy,  Archer,  Evans,  Peking,  Essex, and   PI 468916


QTLs Associated with Satt199
Plant height 26-13
Pod borer 1-3
Pod maturity 34-5
SCN 20-4
Seed protein 28-2
Seed tocopherol, gamma 1-4
Seed tocopherol, gamma 2-4
Seed weight 37-4
Seed weight per plant 6-7


Amplification Info for Satt199
More than one entry indicates that this SSR was independently identified by different labs sometimes using separate methodology resulting in unique primer pairs.
NameSatt199
Primer1GCGGTAAATGGTGAAAATCATTTATGGTT
Primer2GCGTTTTCATACGGTGTTTTGCCTAT
Motif(TA)10(ATA)15*
    
NameBARCSOYSSR_18_1364
Primer1GCGGTAAATGGTGAAAATCATTTATGGTT
Primer2GCGTTTTCATACGGTGTTTTGCCTAT
Motif(TA)10(ATA)15*
    

References for Satt199
Cregan et al. 1999A An integrated genetic linkage map of the soybean genome Crop Sci. 1999, 39(5):1464-1490






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