SoyBase SoyBase transitions to NEW site on 10/1/2024
Integrating Genetics and Genomics to Advance Soybean Research

Locus Type:  SSR


Maps Containing Satt162
Map NamePosition
GmComposite2003_I 86.73
GmConsensus40_I 78.817


Genomic Sequence Information for Satt162
ChromosomeStart PosEnd PosMotifDerived FromPolymorphic*Assembly Version
Gm20 4029901440299064(ATA)17Wm82yesGlyma 1.0
Gm20 4141597441416268(ATA)17Wm82yesGlyma 2.0

*Polymorphic in the following germplasms:
Williams 82,  Noir 1,  Minsoy,  Archer,  Evans,  Peking,  Essex, and   PI 468916


QTLs Associated with Satt162
Internode length 2-7
Lodging 23-1
Lodging 24-1
Plant height 28-1
Pod maturity 23-1
Pods per node 3-3
SCN 34-2
Seed oil 27-9
Seed oil 33-3
Seed protein 26-9
Seed protein 35-3
Seed set 2-1
Seed weight 31-3
Seed yield 25-5
Seed yield 28-6
Seed, beginning 2-1


Amplification Info for Satt162
More than one entry indicates that this SSR was independently identified by different labs sometimes using separate methodology resulting in unique primer pairs.
NameSatt162
Primer1GGGAAGAAGTATATGCTACATCAA
Primer2GGGTTAATTTTTATCTTCTAATAGTTT
Motif(ATA)17
    
NameBARCSOYSSR_20_1170
Primer1GGGAAGAAGTATATGCTACATCAA
Primer2GGGTTAATTTTTATCTTCTAATAGTTT
Motif(ATA)17
    

References for Satt162
Cregan et al. 1999A An integrated genetic linkage map of the soybean genome Crop Sci. 1999, 39(5):1464-1490






Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA
 
USDA Logo
Iowa State University Logo