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Integrating Genetics and Genomics to Advance Soybean Research

Locus Type:  SSR


Maps Containing Satt045
Map NamePosition
GmComposite2003_E 46.65
GmConsensus40_E 77.286


Genomic Sequence Information for Satt045
ChromosomeStart PosEnd PosMotifDerived FromPolymorphic*Assembly Version
Gm15 2472020924720262(AAT)18Wm82yesGlyma 1.0
Gm15 2483401324834152Glyma 2.0

*Polymorphic in the following germplasms:
Williams 82,  Noir 1,  Minsoy,  Archer,  Evans,  Peking,  Essex, and   PI 468916


QTLs Associated with Satt045
Plant height 26-10
Seed Cys 3-6
Seed Met 3-6
Seed N at R7 1-5
Seed oil 36-3
Seed oil 39-8
Seed palmitic 7-3
Seed width 3-2
Seed width to thickness ratio 1-5


Amplification Info for Satt045
More than one entry indicates that this SSR was independently identified by different labs sometimes using separate methodology resulting in unique primer pairs.
NameSatt045
Primer1TGGTTTCTACTTTCTATAATTATTT
Primer2ATGCCTCTCCCTCCT
Motif(AAT)18
    
NameBARCSOYSSR_15_0997
Primer1TGGTTTCTACTTTCTATAATTATTT
Primer2ATGCCTCTCCCTCCT
Motif(AAT)18
    

References for Satt045
Cregan et al. 1999A An integrated genetic linkage map of the soybean genome Crop Sci. 1999, 39(5):1464-1490






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