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Integrating Genetics and Genomics to Advance Soybean Research

Locus Type:  SSR


Maps Containing Sat_419
Map NamePosition
GmComposite2003_I 98.11
GmConsensus40_I 89.764


Genomic Sequence Information for Sat_419
ChromosomeStart PosEnd PosMotifDerived FromPolymorphic*Assembly Version
Gm20 4183648641836527(AT)21Wm82yesGlyma 1.0
Gm20 4295352742953764(AT)21Wm82yesGlyma 2.0

*Polymorphic in the following germplasms:
Williams 82,  Noir 1,  Minsoy,  Archer,  Evans,  Peking,  Essex, and   PI 468916


QTLs Associated with Sat_419
Seed conglycinin, beta 2-7
Seed glycinin 2-7
Seed glycinin plus beta-conglycinin 1-11
Seed glycinin to beta-conglycinin ratio 1-6
Seed oleic 5-3
Seed thickness 1-8
Seed width 4-9
Seed yield 22-5


Amplification Info for Sat_419
More than one entry indicates that this SSR was independently identified by different labs sometimes using separate methodology resulting in unique primer pairs.
NameSat_419
Primer1GCGTTATTGGCATGATGTATTAGT
Primer2GCGTGCTATATCATCTTACAAACTT
Motif(AT)21
    
NameBARCSOYSSR_20_1273
Primer1GCGTTATTGGCATGATGTATTAGT
Primer2GCGTGCTATATCATCTTACAAACTT
Motif(AT)21
    

References for Sat_419
Song et al. 2004 A new integrated genetic linkage map of the soybean Theor Appl Genet 2004 109:122-128






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