SoyBase SoyBase transitions to NEW site on 10/1/2024
Integrating Genetics and Genomics to Advance Soybean Research

Locus Type:  SSR


Maps Containing Sat_404
Map NamePosition
GmComposite2003_C1 73.84
GmConsensus40_C1 50.974


Genomic Sequence Information for Sat_404
ChromosomeStart PosEnd PosMotifDerived FromPolymorphic*Assembly Version
Gm04 1252960512529664(GT)5(AT)25Wm82yesGlyma 1.0
Gm04 1361371313613900(GT)5(AT)25Wm82yesGlyma 2.0

*Polymorphic in the following germplasms:
Williams 82,  Noir 1,  Minsoy,  Archer,  Evans,  Peking,  Essex, and   PI 468916


QTLs Associated with Sat_404
Seed number 3-2
Seed number 3-4
Seed protein 36-6
Seed weight 20-2
Seed weight per plant, variable P 7-2
Seeds per plant, variable P 4-2
Seeds per plant, variable P 4-4


Amplification Info for Sat_404
More than one entry indicates that this SSR was independently identified by different labs sometimes using separate methodology resulting in unique primer pairs.
NameSat_404
Primer1GCGGATGCGCTTAGCCAGAAGATGAGT
Primer2GCGTTCTCCCCCAATGTACATACTTCTACCA
Motif(GT)5(AT)25
    
NameBARCSOYSSR_04_0579
Primer1GCGGATGCGCTTAGCCAGAAGATGAGT
Primer2GCGTTCTCCCCCAATGTACATACTTCTACCA
Motif(GT)5(AT)25
    


Information Providers
Song, Qijian and Cregan, Perry

References for Sat_404
Song et al. 2004 A new integrated genetic linkage map of the soybean Theor Appl Genet 2004 109:122-128






Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA
 
USDA Logo
Iowa State University Logo