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Integrating Genetics and Genomics to Advance Soybean Research

Locus Type:  SSR


Maps Containing Sat_099
Map NamePosition
GmComposite2003_L 78.23
GmConsensus40_L 69.122


Genomic Sequence Information for Sat_099
ChromosomeStart PosEnd PosMotifDerived FromPolymorphic*Assembly Version
Gm19 4352354143523584(AT)22Wm82yesGlyma 1.0
Gm19 4372702943727284(AT)22Wm82yesGlyma 2.0

*Polymorphic in the following germplasms:
Williams 82,  Noir 1,  Minsoy,  Archer,  Evans,  Peking,  Essex, and   PI 468916


QTLs Associated with Sat_099
Canopy wilt 6-2
First flower 22-3
Photoperiod insensitivity 3-2
Phytoph 13-1
Pod number 10-1
Reproductive stage length 4-5
SDS 9-1
Seed length 1-11
Seed phytate 2-2
Seed set 1-4
Seed set 5-43
Seed set, 2 or 3 per pod 1-1
Seed weight 7-7


Amplification Info for Sat_099
More than one entry indicates that this SSR was independently identified by different labs sometimes using separate methodology resulting in unique primer pairs.
NameSat_099
Primer1GCGAAAATGGCAGAGATAA
Primer2AATGCTAAAAGAGGAATGAAATAA
Motif(AT)22
    
NameBARCSOYSSR_19_1251
Primer1GCGAAAATGGCAGAGATAA
Primer2AATGCTAAAAGAGGAATGAAATAA
Motif(AT)22
    

References for Sat_099
Cregan et al. 1999A An integrated genetic linkage map of the soybean genome Crop Sci. 1999, 39(5):1464-1490






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