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Integrating Genetics and Genomics to Advance Soybean Research

Locus Type:  SSR


Maps Containing Sat_038
Map NamePosition
GmComposite2003_O 112.16
GmConsensus40_O 103.64


Genomic Sequence Information for Sat_038
ChromosomeStart PosEnd PosMotifDerived FromPolymorphic*Assembly Version
Gm10 4548039845480439(AT)21Wm82yesGlyma 1.0
Gm10 4605210346052341(AT)21Wm82yesGlyma 2.0

*Polymorphic in the following germplasms:
Williams 82,  Noir 1,  Minsoy,  Archer,  Evans,  Peking,  Essex, and   PI 468916


QTLs Associated with Sat_038
Phomopsis seed decay 3-2
Phomopsis seed decay 4-2
Plant height 31-2
Pod maturity 26-3
Pod maturity 32-3
Pod maturity 33-3
Reproductive stage length 8-2
Reproductive stage length 9-2
SCN 37-1


Amplification Info for Sat_038
More than one entry indicates that this SSR was independently identified by different labs sometimes using separate methodology resulting in unique primer pairs.
NameSat_038
Primer1GCGTCGCAACTTTTTCATTTTTCTTACT
Primer2GCGAGTTCTTTTAACAACACTCACTTTT
Motif(AT)21
    
NameBARCSOYSSR_10_1480
Primer1GCGTCGCAACTTTTTCATTTTTCTTACT
Primer2GCGAGTTCTTTTAACAACACTCACTTTT
Motif(AT)21
    


Information Providers
Song, Qijian and Cregan, Perry

References for Sat_038
Cregan et al. 1999A An integrated genetic linkage map of the soybean genome Crop Sci. 1999, 39(5):1464-1490






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