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Report for Sequence Feature Glyma20g33831

Feature Type:gene_model
Chromosome:Gm20
Start:42316260
stop:42316640
Source:JGI
Version:Wm82.a1.v1.1
High confidence:yes



A newer version of this gene model can be found here:

Annotations for Glyma20g33831
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT4G27570AT Annotation by Michelle Graham. TAIR10: UDP-Glycosyltransferase superfamily protein | chr4:13763657-13765018 REVERSE LENGTH=453 SoyBaseE_val: 3.00E-23ISS
GO:0006499GO-bp Annotation by Michelle Graham. GO Biological Process: N-terminal protein myristoylation SoyBaseN/AISS
GO:0008152GO-bp Annotation by Michelle Graham. GO Biological Process: metabolic process SoyBaseN/AISS
GO:0005575GO-cc Annotation by Michelle Graham. GO Cellular Compartment: cellular component SoyBaseN/AISS
GO:0016757GO-mf Annotation by Michelle Graham. GO Molecular Function: transferase activity, transferring glycosyl groups SoyBaseN/AISS
GO:0016758GO-mf Annotation by Michelle Graham. GO Molecular Function: transferase activity, transferring hexosyl groups SoyBaseN/AISS
PTHR11926Panther GLUCOSYL/GLUCURONOSYL TRANSFERASES JGI ISS
PTHR11926:SF77Panther GLYCOSYLTRANSFERASE FAMILY PROTEIN JGI ISS
PF00201PFAM UDP-glucoronosyl and UDP-glucosyl transferase JGI ISS
UniRef100_G7I302UniRef Annotation by Michelle Graham. Most informative UniRef hit: UDP rhamnose anthocyanidin-3-glucoside rhamnosyltransferase n=1 Tax=Medicago truncatula RepID=G7I302_MEDTR SoyBaseE_val: 4.00E-61ISS
UniRef100_I1LCI8UniRef Annotation by Michelle Graham. Best UniRef hit: Uncharacterized protein n=1 Tax=Glycine max RepID=I1LCI8_SOYBN SoyBaseE_val: 3.00E-65ISS

Expression Patterns of Glyma20g33831
Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology

Glyma20g33831 not represented in the dataset
Glyma20g33831 not represented in the dataset
Libault et al. 2010, Plant Phys 152(2):541-552.
Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection 		Severin et al. 2010, BMC Plant Biology 10:160
RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Gene model name correspondences to Glyma20g33831 Gene Call Version Wm82.a1.v1.1
Corresponding NameAnnotation VersionEvidenceComments
Glyma.20g196300 Wm82.a2.v1IGC As supplied by JGI

References for Glyma20g33831
Schmutz et al. 2010
  Genome sequence of the palaeopolyploid soybean
  Nature 2010, 463:178-183

Coding sequences of Glyma20g33831
>Glyma20g33831.1   sequence type=CDS   gene model=Glyma20g33831   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
ATGCACACTGGTTGGTTTCAGCAGAAGCTTGTGCCGAAACACTCTAGGGTGGGGTGCTATGTATGCCATAGTGGCTTTAGTTCAGTGATAGAAGCAATGTTCAATGACTGCCAACTGGTGCTGTTGCCTTTCAAGGGTGACCAGTTTTTCATGGCCAAGGATTTGGAGGCAGGGGTAGAGGTGAATAGGGGTGATGAAGATGGGTTCTTTCACAAAGAGGATATATTGGAGGCATTGAAAACTATCATTGTGAAGGATAGCAAAGAACCAGGGAAGCACACAAGAGAAAACCACATGAAATGGTGCAAGTTTTTGTCAAATAAGGAAATTCAGAACAAATTCATCACAGGTCTTGCTGCCCAGTTGAAGTCCATGGCTTAG
Predicted protein sequences of Glyma20g33831
>Glyma20g33831.1   sequence type=predicted peptide   gene model=Glyma20g33831   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
MHTGWFQQKLVPKHSRVGCYVCHSGFSSVIEAMFNDCQLVLLPFKGDQFFMAKDLEAGVEVNRGDEDGFFHKEDILEALKTIIVKDSKEPGKHTRENHMKWCKFLSNKEIQNKFITGLAAQLKSMA*






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