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Report for Sequence Feature Glyma20g22751

Feature Type:gene_model
Chromosome:Gm20
Start:32653978
stop:32654631
Source:JGI
Version:Wm82.a1.v1.1
High confidence:yes



A newer version of this gene model can be found here:

Annotations for Glyma20g22751
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT4G19040AT Annotation by Michelle Graham. TAIR10: ENHANCED DISEASE RESISTANCE 2 | chr4:10431799-10437171 REVERSE LENGTH=718 SoyBaseE_val: 2.00E-32ISS
GO:0008150GO-bp Annotation by Michelle Graham. GO Biological Process: biological process SoyBaseN/AISS
GO:0005739GO-cc Annotation by Michelle Graham. GO Cellular Compartment: mitochondrion SoyBaseN/AISS
GO:0005886GO-cc Annotation by Michelle Graham. GO Cellular Compartment: plasma membrane SoyBaseN/AISS
GO:0005543GO-mf Annotation by Michelle Graham. GO Molecular Function: phospholipid binding SoyBaseN/AISS
GO:0008289GO-mf Annotation by Michelle Graham. GO Molecular Function: lipid binding SoyBaseN/AISS
PF07059PFAM Protein of unknown function (DUF1336) JGI ISS
UniRef100_G7K853UniRef Annotation by Michelle Graham. Most informative UniRef hit: Kinase-START n=1 Tax=Medicago truncatula RepID=G7K853_MEDTR SoyBaseE_val: 2.00E-31ISS
UniRef100_UPI0002337E7EUniRef Annotation by Michelle Graham. Best UniRef hit: UPI0002337E7E related cluster n=1 Tax=unknown RepID=UPI0002337E7E SoyBaseE_val: 1.00E-31ISS

Expression Patterns of Glyma20g22751
Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology

Glyma20g22751 not represented in the dataset
Glyma20g22751 not represented in the dataset
Libault et al. 2010, Plant Phys 152(2):541-552.
Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection 		Severin et al. 2010, BMC Plant Biology 10:160
RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Gene model name correspondences to Glyma20g22751 Gene Call Version Wm82.a1.v1.1
Corresponding NameAnnotation VersionEvidenceComments
Glyma.20g094900 Wm82.a2.v1IGC As supplied by JGI

References for Glyma20g22751
Schmutz et al. 2010
  Genome sequence of the palaeopolyploid soybean
  Nature 2010, 463:178-183

Coding sequences of Glyma20g22751
>Glyma20g22751.1   sequence type=CDS   gene model=Glyma20g22751   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
ATGCAGAGCTCATGGATTATATGCCTGAGTGTTGGTAGTACTCCTTGTTTACAGGGAAAGGTGGTTGATTGCAACTATATTCGGGGTCCCAAGTATTTAGAAATTGATGTTGATATTGGTTTTTCTACTGTTGCTAATGGAGTTTTGGGTCTGGTTATTGGTGTGATTACAACATTGGTGGTTGATATGGCTTTTCTTGTACAGGTGAGCTTGATATACTAG
Predicted protein sequences of Glyma20g22751
>Glyma20g22751.1   sequence type=predicted peptide   gene model=Glyma20g22751   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
MQSSWIICLSVGSTPCLQGKVVDCNYIRGPKYLEIDVDIGFSTVANGVLGLVIGVITTLVVDMAFLVQVSLIY*






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