Glyma20g16091 - SoyBase

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Report for Sequence Feature Glyma20g16091

Feature Type:	gene_model
Chromosome:	Gm20
Start:	22230037
stop:	22231104
Source:	JGI
Version:	Wm82.a1.v1.1
High confidence:	yes

A newer version of this gene model can be found here:

Annotations for Glyma20g16091

Database ID	Annotation Type	Annotation Description	Annotation Source	Match Score	Evidence Code
PF05498	PFAM	Rapid ALkalinization Factor (RALF)	JGI		ISS
UniRef100_A8MRD4	UniRef	Annotation by Michelle Graham. Most informative UniRef hit: RALF-like 7 protein n=1 Tax=Arabidopsis thaliana RepID=A8MRD4_ARATH	SoyBase	E_val: 5.00E-07	ISS
UniRef100_I1LUI3	UniRef	Annotation by Michelle Graham. Best UniRef hit: Uncharacterized protein n=1 Tax=Glycine max RepID=I1LUI3_SOYBN	SoyBase	E_val: 1.00E-08	ISS

Expression Patterns of Glyma20g16091

Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology

Glyma20g16091 not represented in the dataset	Glyma20g16091 not represented in the dataset
Libault et al. 2010, Plant Phys 152(2):541-552. Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection	Severin et al. 2010, BMC Plant Biology 10:160 RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Gene model name correspondences to Glyma20g16091 Gene Call Version Wm82.a1.v1.1

Corresponding Name	Annotation Version	Evidence	Comments
Glyma.20g066000	Wm82.a2.v1	IGC	As supplied by JGI

References for Glyma20g16091

Schmutz et al. 2010
Genome sequence of the palaeopolyploid soybean
Nature 2010, 463:178-183

Coding sequences of Glyma20g16091

Limit To All Plant Sequences

>Glyma20g16091.1   sequence type=CDS   gene model=Glyma20g16091   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
ATGGCAATGCCAAAGGGAATGTTGGTTTTGTTGGTTAGCACTCTTCTGGTTTGCTCACTTTTGGGACAACATGCCGAAGCACGTCCAGTTCAAATTGATTATGGGGTAATTAGACGTGACACTATCGTTGGATGCAGCAAAAGACATCCTGCAAATTGCAAACTACCTAGAGCCAATCCATGGAGAAGAGGCTGCGAGGATGAAACTCGATGTCGCCACTGA

Predicted protein sequences of Glyma20g16091

Limit To All Plant Sequences

>Glyma20g16091.1   sequence type=predicted peptide   gene model=Glyma20g16091   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
MAMPKGMLVLLVSTLLVCSLLGQHAEARPVQIDYGVIRRDTIVGCSKRHPANCKLPRANPWRRGCEDETRCRH*

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