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Report for Sequence Feature Glyma20g14814

Feature Type:gene_model
Chromosome:Gm20
Start:20185210
stop:20186365
Source:JGI
Version:Wm82.a1.v1.1
High confidence:yes



A newer version of this gene model can be found here:

Annotations for Glyma20g14814
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT1G10630AT Annotation by Michelle Graham. TAIR10: ADP-ribosylation factor A1F | chr1:3513189-3514230 REVERSE LENGTH=181 SoyBaseE_val: 7.00E-49ISS
GO:0006499GO-bp Annotation by Michelle Graham. GO Biological Process: N-terminal protein myristoylation SoyBaseN/AISS
GO:0007264GO-bp Annotation by Michelle Graham. GO Biological Process: small GTPase mediated signal transduction SoyBaseN/AISS
GO:0046686GO-bp Annotation by Michelle Graham. GO Biological Process: response to cadmium ion SoyBaseN/AISS
GO:0005622GO-cc Annotation by Michelle Graham. GO Cellular Compartment: intracellular SoyBaseN/AISS
GO:0005774GO-cc Annotation by Michelle Graham. GO Cellular Compartment: vacuolar membrane SoyBaseN/AISS
GO:0005794GO-cc Annotation by Michelle Graham. GO Cellular Compartment: Golgi apparatus SoyBaseN/AISS
GO:0005829GO-cc Annotation by Michelle Graham. GO Cellular Compartment: cytosol SoyBaseN/AISS
GO:0005886GO-cc Annotation by Michelle Graham. GO Cellular Compartment: plasma membrane SoyBaseN/AISS
GO:0016020GO-cc Annotation by Michelle Graham. GO Cellular Compartment: membrane SoyBaseN/AISS
GO:0005507GO-mf Annotation by Michelle Graham. GO Molecular Function: copper ion binding SoyBaseN/AISS
GO:0005525GO-mf Annotation by Michelle Graham. GO Molecular Function: GTP binding SoyBaseN/AISS
GO:0016004GO-mf Annotation by Michelle Graham. GO Molecular Function: phospholipase activator activity SoyBaseN/AISS
PTHR11711Panther ARF-RELATED JGI ISS
PF00025PFAM ADP-ribosylation factor family JGI ISS
UniRef100_G7K590UniRef Annotation by Michelle Graham. Most informative UniRef hit: ADP-ribosylation factor n=1 Tax=Medicago truncatula RepID=G7K590_MEDTR SoyBaseE_val: 3.00E-52ISS
UniRef100_UPI000233DC70UniRef Annotation by Michelle Graham. Best UniRef hit: UPI000233DC70 related cluster n=1 Tax=unknown RepID=UPI000233DC70 SoyBaseE_val: 7.00E-59ISS

Expression Patterns of Glyma20g14814
Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology

Glyma20g14814 not represented in the dataset
Glyma20g14814 not represented in the dataset
Libault et al. 2010, Plant Phys 152(2):541-552.
Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection 		Severin et al. 2010, BMC Plant Biology 10:160
RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Gene model name correspondences to Glyma20g14814 Gene Call Version Wm82.a1.v1.1
Corresponding NameAnnotation VersionEvidenceComments

References for Glyma20g14814
Schmutz et al. 2010
  Genome sequence of the palaeopolyploid soybean
  Nature 2010, 463:178-183

Transcripts of Glyma20g14814
>Glyma20g14814.2   sequence type=transcript   gene model=Glyma20g14814   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
AAAAGAAAAAACAGAAAAGAATTCTAAGGCTTAAATATTGGTTGAACCAGAGGCAACAATGGGTTTGACGGTGTCACCGCTATTGAGATTGTTTTATGCAAGGAAAGAAATAAGGATTCTGATGGTGGGTCTTGATGTTGCTGGGAAACCAACAATACTCTACAAACTGAAACTTGGAGAAATAGTCACTACAACAATACCCACAATAGGCTTCAATGTGGAGACTGTTGAGTACAAAAATGTCAGCTTCACCGTCTGGGATGTGGGAGGACAGGACAAGAATACACAAGGTCTTATCTTTGTGGTAGACAGTAACGATAGGGAAAGAATTTTAGAAGCCAGGGATGAGTTATCTTTG
Coding sequences of Glyma20g14814
>Glyma20g14814.1   sequence type=CDS   gene model=Glyma20g14814   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
ATGGGTTTGACGGTGTCACCGCTATTGAGATTGTTTTATGCAAGGAAAGAAATAAGGATTCTGATGGTGGGTCTTGATGTTGCTGGGAAACCAACAATACTCTACAAACTGAAACTTGGAGAAATAGTCACTACAACAATACCCACAATAGGCTTCAATGTGGAGACTGTTGAGTACAAAAATGTCAGCTTCACCGTCTGGGATGTGGGAGGACAGGACAAGAATACACAAGGTCTTATCTTTGTGGTAGACAGTAACGATAGGGAAAGAATTTTAGAAGCCAGGGATGAGTTATCTTTG

>Glyma20g14814.2   sequence type=CDS   gene model=Glyma20g14814   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
ATGGGTTTGACGGTGTCACCGCTATTGAGATTGTTTTATGCAAGGAAAGAAATAAGGATTCTGATGGTGGGTCTTGATGTTGCTGGGAAACCAACAATACTCTACAAACTGAAACTTGGAGAAATAGTCACTACAACAATACCCACAATAGGCTTCAATGTGGAGACTGTTGAGTACAAAAATGTCAGCTTCACCGTCTGGGATGTGGGAGGACAGGACAAGAATACACAAGGTCTTATCTTTGTGGTAGACAGTAACGATAGGGAAAGAATTTTAGAAGCCAGGGATGAGTTATCTTTG
Predicted protein sequences of Glyma20g14814
>Glyma20g14814.1   sequence type=predicted peptide   gene model=Glyma20g14814   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
MGLTVSPLLRLFYARKEIRILMVGLDVAGKPTILYKLKLGEIVTTTIPTIGFNVETVEYKNVSFTVWDVGGQDKNTQGLIFVVDSNDRERILEARDELSL

>Glyma20g14814.2   sequence type=predicted peptide   gene model=Glyma20g14814   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
MGLTVSPLLRLFYARKEIRILMVGLDVAGKPTILYKLKLGEIVTTTIPTIGFNVETVEYKNVSFTVWDVGGQDKNTQGLIFVVDSNDRERILEARDELSL






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